Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1299 ATGGCACACAAGCCTCGTTGCAGTTTATGTTGCGTCTGTTGTGTATACTACACCCTCTTCTTCATGTTCCTTCTTTCTGTCGTGATCTTCTTCATCATCTTCCACCCCTCAAGTGTCAAGTTCCACGTCACAGAGGCCTCCCTCACACAGTTCAATCTCACCAGCAACAACACCCTCTCTTACAACTTCAGAGTGAACATCACAGTGAGGAACCCCAACAAACACATCGTTGTCTATTACAGAAGCATCGGAGCAGTTGCATGGTACAAGAAGAGAACGTTTGCTTGGGCAAACTTAGCACCCTTTGTTCAGGGCCACAAGAACACGAGCTTCCTACAACCAGCAGTGTTCGAAGGTCAGAGAGTGATTGATCTTGAGCCTCGCCACGTGAATGAGTATGAGGAAGAGACAAGGGCAGGGATTTATGACAGCATAGTTGTGGAATTGAATATTCGAATCAGAGCGAAGTATGGGAAGATCAAGAGTGTTCGTTTCAGGCCACCAGTTGTACGGTGTCGTTTGAGAGTTCCTTTGGTTTCAAATGGCAAATTGGCTGCTCCTTTCAATGTCACCAAATGCAAAACTGGCTATTTCTTCACTGACCGCGAGGCAACAGATTGA 621 0.4638 MAHKPRCSLCCVCCVYYTLFFMFLLSVVIFFIIFHPSSVKFHVTEASLTQFNLTSNNTLSYNFRVNITVRNPNKHIVVYYRSIGAVAWYKKRTFAWANLAPFVQGHKNTSFLQPAVFEGQRVIDLEPRHVNEYEEETRAGIYDSIVVELNIRIRAKYGKIKSVRFRPPVVRCRLRVPLVSNGKLAAPFNVTKCKTGYFFTDREATD 206
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1299 206 PANTHER OS05G0367900 PROTEIN 7 178 IPR044839 GO:0098542
Dere01g1299 206 Pfam Late embryogenesis abundant protein 66 165 IPR004864 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g1299 Dere-ChrDere01 25562754 25563374 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1299 33 179 SNARE and Associated Proteins AT1G32270 33.333 2.12e-20 85.5