LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere01g1291	ATGGGTATTGGGTACCCGTGGGAGAAAGAATGGTTTTTTCCTTATCCTGCTGCCATGGTAGTTGCTTTGAGGTGGAGGAAGCTTTGCTTATATGCTTTGCTTAATCATCTCGTGTTGCTGATTATGGATCCTCCAATGCATCCTGATTCAAGCTTTGATGAGGTTAAGAAGAAACCATGGAAGCAAACCATCCTCCTGTCTTCTCAAATCGTTGGAGTAGTTTATGGTCAACTGAGCACTGCACCCTTGTACGTCTTCGGGACTATCCGATCAACAGATGTTGCATCGGAGGAGGTTGTTTATGAACTCTTCTCCTTCTTATTCTGGACTCTGACTGTCATTTCTTTACTGAAGTACGCCTTTATAGTGCTGAAAGCTGATAATGATGGAGAAGGTGGTACTTTTGCGTTATACTCACTCTTGTGTAGACATGCAAATGTTGGCCTGCTCCCATGTGATAGAAGCACTGATGAGATAATTCATTACGATGAGAAGAGTCCCTTTAACCGTAAGGTGGATTCAAGGGCTCGAAGGGCCATTGAGAAACATAAAAGCTGTCACTATTTACTGTTGTTCTTGGCTCTCTTTGGATCCTGTATGACTATTGGTGATGGGGTGCTCACTCCAGCACTTTCTGTGTTATCAGCTTCAACGGGTGTTCAAAGATCGCTGTCAGATATGTCACACATATTTTCCTCTTCGCAACATTCTCAGGAGTCAGTGTCAGAGGCTCTAAAAAGATATGTACCTGTTCCATCTGCATGTGCTATATTGGTCGGCCTTTTCATGCTGCAGCACTGTGGGACGCGTAGAATTGGGTTCATGTTTGCTCCAATCATTTTTATTTGGCTTTTATTTATTGGTGTAGTGGGAGTGTATAATATTTTCCACTGGAACGTGGAAATCATTCATAAAATATCCCCAGTATACATGTTCAAATTCATCAGAAATATTCATCTTCGCAGATGGAGATTGTTGGGGAGCATCATTTTATGTGTAGCAGGATCAGAGGCGATGTTTGCTGATCTAGGTCATTTTTCCAAGAAATCAATCCAGATTACATTCCTCTGCTTGATCTATCCACTTCTTGTTTTATGCTATGCGGGTCAGGCTGCCTATATCTCAAAGAACTTAGATGTTGAGGACTTTAATCATCTTGGCGAATCTATGCCTAGTCACTGCAAGCATGTGTTCACAGTATTATCCCTATTTGCTTCAGCTGTTGGAAGCCAAGCAACTATAACAGCGAGTTTCTCCATCATTAACCAATGCCTAGCTCTAAATTGCTTCCCCAGAGTAAAAGTCATTCACACATCAAAGAAGATACATGGACAGATTTACATCCCAGATGTCAACTGGTTATTGATGATTCTCAGTCTCACTGTCACTGTTGGTTTCCGAGACATGGTGAAAATCGGTAACGCGGCAGGTTTGGCTATAATTTGTGGAATGCTTGTAACAACTTGTCTGATGTCACTAATCATTGCTCTGTACTGGGAGAAGAACTTGCTTGTCTCTGCGTGCTTTCTTTTTTGTTTCGGCTCTCTCGAGGCTGCATATCTTTCGGCATGTCTGCTAGAATTTCACAAGGGAGCTTGGTATCTAGTTGTCCTCTTGGTGGTGACCATGACAATCATGCTTGCATGGCATTATGGAACTGTGAAGAAGTATGAGTTTGACATGGAAAACATGGTATCAACTGAATGGCTAATAGATGTTAGTCCAAACCTCGGCATTTCCAGGGTACCAGGAATTGGCTTCATCTACACTGACATCGTAGCAGGAATCCCAGCTTTCTTTTCGCATTTCATCACTAATCTTCCTGCATTTCATCAAGTTCTGATCTTTGTGTCCTTCAAGTCTCTACCAGTGCCTTATGTCCCTGAAAGTGAAAGGTATCTCATAGGCAGGATTGGGCCAAAAGATTATAAAATTTACCGATGCATTGTCAGATATGGATACTGCGATCACATAAGGGACACAGATAATTTTGAGGAGCAGATAATTTGTTCTATAGGGGAATTCATTCATGTTGAACAGACTGACATTGAATCCATGGATCCCCCACATGGAAGAATGATCATCATTGGAAATTCAACCCCATCTGATGGAAATGCTTTACTTCCTCTGGAAGATAATGAATCAGACGTGGAGCCAAGCCCAGTGAGCAATGAATCTCAGATAATCCCTATAGGTGATTATTTGGAGAGAGCTAGCCCTACTCCTCGGAAGAAAAAAAAGGTCCGTTTTATGTTGCCTGCAAATAGTCCTAAAATGCAGGCATCTGTGAGGAAGGAGCTCTTAGAGCTGATTGATGCTAGGGAGAGTGGTAGTGCCTATTTCCTAGGCCAATCTCATATAGTGGTTCGTGATGGCTCAAGCTTTCTGAAGAGATTCCTAATCATGACCTACCGATTGAGCGAAAAGAACTGTCGCGAGCCTCCAGTAGCACTGAAGATCCCTCATGCTGCTCTTGTAGAAGTTGGTATGGTCTGTACTATATAA	2505	0.4236	MGIGYPWEKEWFFPYPAAMVVALRWRKLCLYALLNHLVLLIMDPPMHPDSSFDEVKKKPWKQTILLSSQIVGVVYGQLSTAPLYVFGTIRSTDVASEEVVYELFSFLFWTLTVISLLKYAFIVLKADNDGEGGTFALYSLLCRHANVGLLPCDRSTDEIIHYDEKSPFNRKVDSRARRAIEKHKSCHYLLLFLALFGSCMTIGDGVLTPALSVLSASTGVQRSLSDMSHIFSSSQHSQESVSEALKRYVPVPSACAILVGLFMLQHCGTRRIGFMFAPIIFIWLLFIGVVGVYNIFHWNVEIIHKISPVYMFKFIRNIHLRRWRLLGSIILCVAGSEAMFADLGHFSKKSIQITFLCLIYPLLVLCYAGQAAYISKNLDVEDFNHLGESMPSHCKHVFTVLSLFASAVGSQATITASFSIINQCLALNCFPRVKVIHTSKKIHGQIYIPDVNWLLMILSLTVTVGFRDMVKIGNAAGLAIICGMLVTTCLMSLIIALYWEKNLLVSACFLFCFGSLEAAYLSACLLEFHKGAWYLVVLLVVTMTIMLAWHYGTVKKYEFDMENMVSTEWLIDVSPNLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLIFVSFKSLPVPYVPESERYLIGRIGPKDYKIYRCIVRYGYCDHIRDTDNFEEQIICSIGEFIHVEQTDIESMDPPHGRMIIIGNSTPSDGNALLPLEDNESDVEPSPVSNESQIIPIGDYLERASPTPRKKKKVRFMLPANSPKMQASVRKELLELIDARESGSAYFLGQSHIVVRDGSSFLKRFLIMTYRLSEKNCREPPVALKIPHAALVEVGMVCTI	834

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere01g1291	834	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	55	832	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere01g1291	834	Pfam	K+ potassium transporter	69	655	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere01g1291	834	NCBIfam	potassium uptake protein	68	834	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere01g1291	Dere-ChrDere01	25493870	25500217	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere01g1291	49	834	Inorganic Solute Cotransporters	AT1G70300	47.015	0.0	737