Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1290 ATGGACATGGAATCTCACGGACTTCTTAATAGTGAGAACAATGAAGACCACAAGGATGAGATCCTCAAGAGAAGAATCTCTAGCCATCCTCTCTACGAACTGCTGGTTGAAACTCACTTGGATTGTTTGAAGGTAGGTGAAATTTCAAACTTGGACAGAGAGCAGAAGATAGATCAGAAGCAAGCAATGAACAAAGAAAGCTTGGACATGCTTAGTGAGCCAGAGCTTGATCTCTTCATGGAAGCATATTGCTTGGCATTGGGGAAGCTGAAAGAAGCAATGGAGGAACCACAACAGAAGTCCATAGCTTTCATCAACAACATGCATTCACAACTCAAGGAGCTCACTAGGACCACCTTGCCTGATCAACCTGCTCCTCCCACATCTTCTTCACACTGCATTTTTCAGAATGATTCTTCAATTTAG 426 0.4296 MDMESHGLLNSENNEDHKDEILKRRISSHPLYELLVETHLDCLKVGEISNLDREQKIDQKQAMNKESLDMLSEPELDLFMEAYCLALGKLKEAMEEPQQKSIAFINNMHSQLKELTRTTLPDQPAPPTSSSHCIFQNDSSI 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1290 141 SMART KNOX2_2 66 117 IPR005541 GO:0003677|GO:0005634
Dere01g1290 141 Pfam KNOX1 domain 22 46 IPR005540 GO:0003677|GO:0005634
Dere01g1290 141 Pfam KNOX2 domain 72 116 IPR005541 GO:0003677|GO:0005634
Dere01g1290 141 SMART KNOX1_2 20 66 IPR005540 GO:0003677|GO:0005634
Dere01g1290 141 MobiDBLite consensus disorder prediction 118 141 - -
Dere01g1290 141 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 11 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1290 Dere-ChrDere01 25485358 25488409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1290 20 120 Homeobox Transcription Factor Family AT4G08150 36.449 2.71e-14 66.6