Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1288 ATGATCCCATCAGTGGACCCCACTCCTTCCCCCATATCCTTCCTCCTTCCTCAGCCGTCACCCTCAGAGACTCCACTCTTCTTCTCCTACTCATATATACCCTTCACCCCTCAACTTCTTCACCCAATTCCTCTCTCTCCCCCCCGCCACCCAATGGCTCTCGTCCGCGATCGCCGCCACCTCAACCTCCGCCTCCCTCTGCCGGAGCCTTCCGAACGCCGCCCTCGCTTCCCCCTCCCCCTCCCTCCCACCTCCACTTCCTCCAACAACTCCACCGCCGCCGCCGACGACATCGCTCCTAACGACCTCGAAAAGCTTCAGGTGCTCGGCCATGGCAACGGAGGCACCGTCTACAAGGTCCGCCACAAGCGCACCTCCGCCATCTACGCTCTCAAGCTCGTCCACAGCGACTCCGACCCGATGGTCCGCCGGCAAGTCCGACGGGAGATGGATATCCACCGCCGGACGGACTCGCCTTATGTAGTACAGTGTCAGGGGTTCTTCGAGAAGCCTTCCGGCGACGTGTCGATTGTGATGGAGTACATGGATTTGGGCACGCTGGACACTTTGTTAAGGAAGAACGGTACGTTTTCTGAAGCCCAACTCGCGGTGGTGGCGCGTCAGGTTTTACACGGGCTGAGCTACCTCCACGCTCACAAGATTGTCCACCGCGATATCAAGCCCTCGAACCTGCTGGTGAATCAGAAGATGGAAGTGAAAATCGGTGATTTCGGAGTGAGCAAGATCATGTGCCGCACGCTGGACGCGTGCAATTCATACGTTGGAACCTGCGCGTACATGAGCCCGGAACGGTTCGACCCGGATAGCTATGGCGGGAATTACAACGGGTATGCGGGTGACATATGGAGCTTGGGTCTGACCCTGTTTGAACTGTACGTGGGTCACTTTCCGTTTCTACCGGCGGGTCAGAGACCCGATTGGGCGACCCTGATGTGTGCGATTTGCTTCGGAGACCCGCCTAGCATGCCGGAGCAGTCTTCCGAGGAGTTTCGGAGCTTCATAGAGTGTTGCTTGAAGAAGGAGTCCAGCGAGAGGTGGAGTGCTTCTCAGCTTTTGACCCACCCGTTTCTCTGTAAATAA 1101 0.5777 MIPSVDPTPSPISFLLPQPSPSETPLFFSYSYIPFTPQLLHPIPLSPPRHPMALVRDRRHLNLRLPLPEPSERRPRFPLPLPPTSTSSNNSTAAADDIAPNDLEKLQVLGHGNGGTVYKVRHKRTSAIYALKLVHSDSDPMVRRQVRREMDIHRRTDSPYVVQCQGFFEKPSGDVSIVMEYMDLGTLDTLLRKNGTFSEAQLAVVARQVLHGLSYLHAHKIVHRDIKPSNLLVNQKMEVKIGDFGVSKIMCRTLDACNSYVGTCAYMSPERFDPDSYGGNYNGYAGDIWSLGLTLFELYVGHFPFLPAGQRPDWATLMCAICFGDPPSMPEQSSEEFRSFIECCLKKESSERWSASQLLTHPFLCK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1288 366 FunFam Mitogen-activated protein kinase 2 184 366 - -
Dere01g1288 366 CDD PKc_MAPKK_plant_like 101 364 - -
Dere01g1288 366 FunFam Mitogen-activated protein kinase kinase 1 84 183 - -
Dere01g1288 366 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Dere01g1288 366 MobiDBLite consensus disorder prediction 65 95 - -
Dere01g1288 366 Gene3D Phosphorylase Kinase; domain 1 83 178 - -
Dere01g1288 366 SUPERFAMILY Protein kinase-like (PK-like) 99 365 IPR011009 -
Dere01g1288 366 Gene3D Transferase(Phosphotransferase) domain 1 179 366 - -
Dere01g1288 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Dere01g1288 366 SMART serkin_6 103 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1288 366 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 87 366 - -
Dere01g1288 366 ProSiteProfiles Protein kinase domain profile. 103 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1288 366 Pfam Protein kinase domain 104 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1288 Dere-ChrDere01 25467925 25469025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1288 52 364 MAP Kinase Kinase Gene Family AT1G73500 66.242 5.74e-143 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Dere01g1288 Pkinase 2.1e-66 CL0016