Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1251 ATGTATTTTGTCGGGAGCTTTGCACAGCATTGTCAAGGGAACATGGCAGCTTCAGAAATGGATGAGGTGCCAATGCTGTCAGAGACACGTAAACAACCATCAGTTAAACTTGTGGATTCTGAATTCCAGAGGCTTGTAACTAGGACACGAAGTGCATCAATATCTATTCCTATGAGCTCCATGGAGCCCTACGAGAGAGAAACTAGTCTTGTGGGACATACTGGTCCACTAAGGAGTGAGAGAAAAACCCCCTTTGTGCAGATGAGTGGTCCACTATATGTCACCCACAGACCTGGAAACTATTTTTGGCAGAATGTCAGTGTCACAGGGAACAAAGCTGTGGAGGGCGTGACAGAAAAATTTTCTTCTTTGTCTGGCACAGGTGAAAGGCATAATTCCTATGCTCCCAAAAATGAACACTTACTGAGGTCTGGGCAACTAGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACTTATTTCAAGGCTTCTCAGCAAAGGAATCCAAAGGCTTCTGGTTTATTTGATCCCAAGTTCCACAATGCTCTTTATGGAGATGCCAAGGGTTGTGCAAGAAGATTTTTTTCATTTCTGTCTTCATATATCCCTGGAGTTATGAATCCTCATGCGAAAGTTGTACAGCATTGGAACAAGTGTTTTTTCATTTCTTGCTTGGCGGCTATTTTTGTGGATCCATTATTTTTCTTATTGCTCTCTGTAAAAGAGGATTTTAAATGTATTGTCATTAACTGGACAATGACCATGACACTTGTTCTCTTTAGAACCATGAATGATTTTGTATGCTTTCTAAACATTCTTCTCCAGTTTAGGTTGGCTTATGTAGCTCCTGAGTCCAGGGTGGTTGGTGCTGGCGAGTTAGTTGACCATCCAAAGAAAATTGCTCTCCATTACTTGCAGGGTTATTTTCTTATTGACGTATTTATTGTATTTCCACTTCCTCAGATAATTATATTGTTTGTCCTGCCACATTACTTGGGGTTATCAGGAGCAAATTTAGCTAAGAATCTTCTGTGTGCAGCAGTCCTTGTTCAGTATATTCCCAGATTGTGTAGGTTTCTGCCACTGCTAATTGGTCAGTCTCCAAGCGGATTCATATTTGAGTCAGCATGGGCAAATTTCTTTATCAATCTTCTCACTTTTATGCTATCTGGCCATGTTGTTGGGTCTTGCTGGTATCTCCTTGGTCTACAGAGGGTTAACCAATGTCTGCGAAATGCCTGCCATAGAGCGCAAATTCAAAATTGCATGGAATTAATTGATTGCGGACATGGTGATACACAAACTATTCATTCTGGCTCAAATCTGTGGGCAAACAATTCTGCTGCAAGTGATTGTTTGTCGGACAACAGTAGTTTTCCTTATGGTATCTATGAGAAAGCTGTTCCACTTACTACAGAACATAATGTGATCACCAGATATGTATATTCATTATTTTGGGGGTTCCAGCAAATCAGTACTCTCGCTGGTAATCAAAACCCAAGCTATTTTGTCTGGGAAGTTCTTTTTACAATGGGCATCATAGGACTGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAATATACAGAACTTTCTTCAAGCTCTTGGACGGAGGAGGCTAGAAATGTCACTTAGACGTCGAGATGTGGAGCAATGGATGAGCCACCGACGCTTGCCAGAAGATGTAAGAAGGAGAGTACGACTGGCTGAACGATATAATTGGGCTGCAACCAGAGGGGTAAATGAAGAAATGCTTCTGGAGAATTTACCAGAAGATCTTCAGAGAGACATAAGACGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTTGCACTGATGGATGAACCTATCTTAGATGCCATTTGTGAGAGATTACGACAAAGGACATACATCAAAGGAAGTAATATTTTGTACCACGGTGGTCTGGTAGAGAAAATGGTGTTTGTTGTGCGTGGAAAATTGGAGAGCACTGGAGAGGATGGGTTTAAGGTTCTCTTATCTGAAGGGGATGCCTGTGGTGAAGAACTTCTTACATGGTGTCTTGAACATTCTTCTGTGAACAAAGATGGTAAAAAGGTGAGGATTCCTGGACAAAGATTGGTCAGCAACAGGACGGTATGCTGCTTAACAAATGTGGAGGTGTTTTCACTCCGATCAGCAGACCTTGAAGAAGTCACTAGCCTTTTTACACGATTCCTAAGAAATGCACGTGTTAAAGGAGCCATAAGGTATGAATCTCCTTATTGGAGAAGCCTTGCAGCAACTCGCATTCAGGTTGCATGGAGATACAGAAAAAAATGTCTAAGTCGTGCTGACACCTCACGGTCAAATCAATCGTTGAGTTCGTAG 2355 0.4149 MYFVGSFAQHCQGNMAASEMDEVPMLSETRKQPSVKLVDSEFQRLVTRTRSASISIPMSSMEPYERETSLVGHTGPLRSERKTPFVQMSGPLYVTHRPGNYFWQNVSVTGNKAVEGVTEKFSSLSGTGERHNSYAPKNEHLLRSGQLGMCNDPYCTTCPTYFKASQQRNPKASGLFDPKFHNALYGDAKGCARRFFSFLSSYIPGVMNPHAKVVQHWNKCFFISCLAAIFVDPLFFLLLSVKEDFKCIVINWTMTMTLVLFRTMNDFVCFLNILLQFRLAYVAPESRVVGAGELVDHPKKIALHYLQGYFLIDVFIVFPLPQIIILFVLPHYLGLSGANLAKNLLCAAVLVQYIPRLCRFLPLLIGQSPSGFIFESAWANFFINLLTFMLSGHVVGSCWYLLGLQRVNQCLRNACHRAQIQNCMELIDCGHGDTQTIHSGSNLWANNSAASDCLSDNSSFPYGIYEKAVPLTTEHNVITRYVYSLFWGFQQISTLAGNQNPSYFVWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRRRDVEQWMSHRRLPEDVRRRVRLAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQRTYIKGSNILYHGGLVEKMVFVVRGKLESTGEDGFKVLLSEGDACGEELLTWCLEHSSVNKDGKKVRIPGQRLVSNRTVCCLTNVEVFSLRSADLEEVTSLFTRFLRNARVKGAIRYESPYWRSLAATRIQVAWRYRKKCLSRADTSRSNQSLSS 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1251 784 SUPERFAMILY Voltage-gated potassium channels 212 540 - -
Dere01g1251 784 ProSiteProfiles cAMP/cGMP binding motif profile. 611 679 IPR000595 -
Dere01g1251 784 CDD CAP_ED 611 727 IPR000595 -
Dere01g1251 784 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 150 773 - -
Dere01g1251 784 Gene3D - 220 536 - -
Dere01g1251 784 Gene3D Helix hairpin bin 539 603 - -
Dere01g1251 784 Pfam Ion transport protein 217 539 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere01g1251 784 Gene3D Jelly Rolls 609 733 IPR014710 -
Dere01g1251 784 SUPERFAMILY cAMP-binding domain-like 539 735 IPR018490 -
Dere01g1251 784 SMART cnmp_10 611 746 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1251 Dere-ChrDere01 24929066 24943914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1251 18 689 Ion Channels AT3G17700 63.516 0.0 840