Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1200 ATGCATAGTCTATTCTCCCCCATTTTATTTCTCAGAAGAATGAAAGAAATTCTTTCAGAGCCATGGCTAGTTACGTTTATGATGCTAGTGGTCACTGTGATATTTGCAAAACTAATACAAGTCAAGTTGAAGAAGGCAGAGAAAGGAACACGCAGGTTGCCACCGGGAAGAAGAGGCTGGCCTTTGATCGGTGACAGCATCAATTGGTACAATGCAGTGGCAAGTTCTCATCCTCCTCAGTTTGTTGAACAAATGGTTCAAAGGTACGGTAAGATATTTTCTTGCAGCCTATTTGGGAAATGGGCAGTGGTGTCAGCAGATCCTAGCTTCAACCGTTTTGTGATGCAAAACGAAGGGAAGTTATTTCAGTCTAGTTATCCGAAATCATTCAGAGATTTAGTTGGTAAAAATGGTGTGATCACAGTGCAAGGTGAACAGCAAAGGAAGCTGCACGGGATTGCCTCCAACATGATGCGCTTAGAGAAGCTCAAGTTCCATTTCTTGAATGACATTCAAAAGGTCATGCTTCAAACTCTGAGCAATTTCAACGACAATCAAGTCATTCTCCTCCAGGATGTAGCTATAAACTTAATGGTTAATCAACTATTAGGGGTGTCAACTGAGTCACAAATCATTGAGATGGCTCAACTGTTTTCTGACTTTGTTGATGGTTGTTTATCTGTTCCCATCAATGCACCGGGGTTTACATACCACACTGCTATGAAGGCAAGGGAGAAAATCATAAGCAAGATAAACAAGACAATAGAGTTACACAGGCAACATGGTGCTCCAGAAGTAGGCAATGGTGTACTAGGGAGACTACTAGAGGAAGAAAGTTTACCAGATGACGCAGTTGCAGACTTCATCATCAATCTTCTCTTCGCAGGGAATGAAACTACCACCAAAACCATGCTTTTTGCAGTCTATTTCCTCACTCAATGCCCTAGAGCCTTGAAACAGCTACTGGATGAACAAGAATCTCTTAGGAGTGATTCTGTAGGAGAAGAAATGCTTACATGGGAGCATTATAAAGCAATGCCATTCACTCAATGTGTAATTGATGAAACCCTGAGACTTGGGGGCATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGATGTTAATTACCAAGATTTTGTTATTCCCAAGGGATGCTTTGTGGTTCCATTTCTTTCTGCAGTCCATTTGGATGAGAATGTGTACAAAGGAGCTTCAAACTTCTATCCTTGGAGATGGATGGAACCTGAAAATGAGGAAAAGAGAAACTGGAGAAGTAGTCTGTTCTATGCACCCTTTGGAGGAGGTGCTAGATTCTGTCCAGGCGCAGAGCTGGCTCGCCTTCAGATTGCTCTTTTTCTTCATTACTTTGTAACTACATACAGATGGACACAAGTGAAAGAAGATAGGATGTCCTTCTTTCCCTCTGCTCGATTAGTGAATGGTTTTGAAATTCGCTTAACCAAACGGCATGGTCATGAAACCAAGTGA 1488 0.4167 MHSLFSPILFLRRMKEILSEPWLVTFMMLVVTVIFAKLIQVKLKKAEKGTRRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEQMVQRYGKIFSCSLFGKWAVVSADPSFNRFVMQNEGKLFQSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKVMLQTLSNFNDNQVILLQDVAINLMVNQLLGVSTESQIIEMAQLFSDFVDGCLSVPINAPGFTYHTAMKAREKIISKINKTIELHRQHGAPEVGNGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPRALKQLLDEQESLRSDSVGEEMLTWEHYKAMPFTQCVIDETLRLGGIAIWLMREAKEDVNYQDFVIPKGCFVVPFLSAVHLDENVYKGASNFYPWRWMEPENEEKRNWRSSLFYAPFGGGARFCPGAELARLQIALFLHYFVTTYRWTQVKEDRMSFFPSARLVNGFEIRLTKRHGHETK 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1200 495 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 PANTHER CYTOCHROME P450 26 51 467 - -
Dere01g1200 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Dere01g1200 495 Pfam Cytochrome P450 54 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 PRINTS E-class P450 group IV signature 346 362 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 PRINTS E-class P450 group IV signature 423 439 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 PRINTS E-class P450 group IV signature 439 457 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 PRINTS E-class P450 group IV signature 80 103 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 PRINTS E-class P450 group IV signature 395 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 PRINTS E-class P450 group IV signature 286 312 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 CDD CYP90-like 86 488 - -
Dere01g1200 495 SUPERFAMILY Cytochrome P450 51 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g1200 495 Gene3D Cytochrome P450 42 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1200 Dere-ChrDere01 24209255 24213521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1200 17 489 Cytochrome P450 AT1G73340 70.146 0.0 707