Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1174 ATGGAAGCGATGGCTGAAATGGCGAGAGTGTTGATGATAATGGAGGTGATCATGGTTGTAATAAGTGGCTCGAGGTTTAGTGGAGCAGATGGTTTGAGCATGGAATACTACTTGGTGAGCTGCCCCTTTGTTGAACCTGTTGTTAAGAACATAGTGAACAGAGCTTTGCAGGATGATCCCACCCTTGCTGCTGGTCTTCTTAGAATGCACTTCCATGACTGCTTCATACAGGGATGTGATGCATCAATTCTGATCGATTCAACAAAGGACAACACAGCAGAGAAGGATTCACCGGCAAATTTGAGCTTGAGAGGCTATGAAATCATAGACGACATAAAAGAAGAGCTTGAAAGGCAATGCCCCGGCGTCGTTTCATGTGCAGACATTCTTGCAATGGCCGCCAGAGATGCAGTTTTCTTTGCTGGAGGACCAGTGTACGACATAGCCAAGGGAAGAAAGGATGGAAGAAGGTCTAAAATAGAGGACACATTCAATCTGCCAGCCCCAACCTTCAATGCCTCTCAGCTCATCCAAATGTTTGCCCAACATGGCTTTTCTGCCCAAGAGATGGTTGCTCTCTCTGGGGCACATACGCTAGGAGTGGCAAGGTGTTCATCTTTCAAGAGCCGACTGTCCCAGGCTGATCCAACGTTGGATTCGGAGTTTGCAAAGACACTGTCGAAAACATGCAGTGCTGGCGACAATTCCGAGCAGCCCTTCGACGCCACCAGGAACAACTTCGACAACCTGTACTACAATGCTTTGTTGAGGAAAAATGGGCTTCTTACGTCTGACCAGACACTCTACACTAGCCTCAGAACGAAGAACTTTGTGAACGGTTATGCAGTCAACCAGGCCATGTTCTTCTTTGACTTCCAGCAGGCTATGGTGAAAATGAGTCTCCTTGATGTCAAAGATGACTCCATGGGGGAAGTACGAGAGAGCTGTCGTAAAATCAACTGA 963 0.4735 MEAMAEMARVLMIMEVIMVVISGSRFSGADGLSMEYYLVSCPFVEPVVKNIVNRALQDDPTLAAGLLRMHFHDCFIQGCDASILIDSTKDNTAEKDSPANLSLRGYEIIDDIKEELERQCPGVVSCADILAMAARDAVFFAGGPVYDIAKGRKDGRRSKIEDTFNLPAPTFNASQLIQMFAQHGFSAQEMVALSGAHTLGVARCSSFKSRLSQADPTLDSEFAKTLSKTCSAGDNSEQPFDATRNNFDNLYYNALLRKNGLLTSDQTLYTSLRTKNFVNGYAVNQAMFFFDFQQAMVKMSLLDVKDDSMGEVRESCRKIN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1174 320 FunFam Peroxidase 35 174 - -
Dere01g1174 320 SUPERFAMILY Heme-dependent peroxidases 31 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 Gene3D - 35 320 - -
Dere01g1174 320 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Dere01g1174 320 FunFam Peroxidase 167 299 - -
Dere01g1174 320 ProSiteProfiles Plant heme peroxidase family profile. 31 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 PANTHER - 12 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 Pfam Peroxidase 48 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g1174 320 Gene3D Peroxidase, domain 2 167 299 - -
Dere01g1174 320 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Dere01g1174 320 CDD secretory_peroxidase 31 319 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1174 Dere-ChrDere01 23636699 23639573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1174 6 320 Peroxidase AT4G33420 72.785 2.17e-168 471