Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1168 ATGGAGTGCAATAAGGATGAGGCCACTAGAGCTAAAGAAATCGCTGAGAGGAAGTTTATTGCAAAGGACATATTGGGGGCAAAGAAATTTGCTTTAAAGGCTCAAAATTTATTTCCTGGGCTTGAGGGTATTCCCCAAATGTTAGCTACACTTGATGTGTATATTTTTGCAGAGAATAAAATAAATGGTGAAGCAGATTGGTATGGTATACTTGGTGCAGATCCCCTGGCTGATGATGAAACAATCCGGAAACAATATAGGAAGCTGGCTCTCACGCTTCACCCTGATAAGAACAAGTCTATTGGAGCTGATGGGGCATTTAAACTTATTTCAGAGGCATGGAGTTTACTGTCAGATAAGGCTAAAAGGGTAGCATATGATCAGAAGAGAAACATAAAAGGACAGAAAGTTTCAACAAAGTCTGGTGGCACATCAGCACATCCAGGGACGAATGGAAATTACAATTTTACAAAAAGTGCCACTTCTAGTGCAAGAGCTCATAAGAATACTACTAAACCACATGCTTCAACTTCTACCCACAAGTCAAAATCAAATACATTCTGGACTGTTTGCAATCGATGCAAAATGCAGTATGAGTATCTTAGAGTTTATCTTAATCTTAAACTCCTGTGTCCCAACTGCCATGGGGCATTTTTGGCTGTAGAAACAGCTCCGCCGCCTGCAAGTGGTGTTAGACCTGCCACCTCGTTTAGCTTTTCCCGGCAGCAGCAAAATTTCAATAACCAAGTGCCTAGTAAGAACAAATCTAACACAGGAAAGAACAAGACAACCCCAAATGTTGGATCAGGGGGTTATAGTAATACTGACTCCTATAATCAAACTGATTTCCAGTGGGCTCCATTCTCAAGAACATCTGGTGTTTCCACAGCAGCTCAGGCTGCAAGTGTGGTTCAGCAGGCATATGAGAAAGTGAAGCGAGAGCGTGAGGAGGCACAAGCAGCTACTAAAAGGGAACAGGCTTTACGAAGGAAGCAGCATGCTTCTAAAAAAGGGTGCATTAATCCTGCAAAGAGAAGAAGGGGAATGGAGGATGCTAGTGTGAGTGGCCATAGTAAGGAACCTGCAAATCAAAGGGGAATGAGAAATGGAGTGGTAGGAGGAGCTAACTCGTGTGGTTCTAAACCAGGTAGTTTTGATCCTATCTGGATAAATGGTAGCTCAAAGGCCAGTGGTGAAAGAGTTTTTTCCCAGCTTGAGCTTAATAATCTTCTTATGGTGAGATCTAAAAATGAAATTGACAAGAAACTGAAGGAAATTCAGTCAAATACTGTTTCCAAGACAGCAGTGAAAGAGAGTGGAAATGTATACCAGAAAACAAATGAAAAAGGAGAAAAATCTTTAAGAAGCTCTGAGACATGTGATCAAAATAACATCAGGAAATCAGAAGATAGGGATAGTGGATCCTATGGCATCAGGAATTTGGCTGAAACTACTGCTGCTAACATAGAGAAAACAACGTTAATAGATATCCCAGATTCTGATTTTCATGATTTTGATAAGGATCGAATTGATAGATCCTTTGGTGTAAATCAAGTATGGGCTACATATGATGATGATGATGGGATGCCGCGAAATTATGCTATGATTCACAGTGTGATTTCTTTGAGTCCATTTAAGATGCGGATCCGTTGGCTCAAATCAAAGACCAATGGTGAATTTGCCCCTCTAAATTGGATTGCTTCAGGCTTTTCTAAAACTTGCGGGGTTTATAGAATGGGAAGATATGAAATTAATAATTCACTCAATTCTTTTTCTCACAAGGTCAGGTGGAGAAAAGGTGCTCATGGAGCCATTTGTATTTATCCCATGAAAGGGGATGTTTGGGCTCTCTATAGGAATTGGTCCCCTGACTGGAATGAACTGACAGCAGATGAGGTGATACACAAGTATGATATGGTTGAAGTACTTGAGGATTTTAATGAAGAACATGGTGTTGTTGTCATTCCCCTGGTAAAAGTGGCCGGTTTCAAGACATTATTTCATCGGCACTTAGATCCAAGAGAAATTAGGATCATTTCAAGGGAAGAGATGTTTCGGTTCTCTCATCAGGTCCCTTCATACTTACACATAGGTAAAGAAGCACCAAATGCTCCAAGGGGTTGCCAGGAGCTGGACCCAGCAGCTACTCCATCTGAACTTCTTCAGGTAATAAAAGCTGTAAGAGAGGAAGACATGGTGTGCACGGAGGATATTAGTGTAGAAGAAACAGCAATAGATAACATTGAAAGATCTAATGATGAGGAAATGATCAACGATATGGGAAAGGTTAGGAAAGGAAAGGAGAAAAGCAATAAAGATATTGAGGAAGTTGAAACTTTGGAAGAGGACAAAGAAGATAAGCGAGAGAATGTAGACTGA 2379 0.4069 MECNKDEATRAKEIAERKFIAKDILGAKKFALKAQNLFPGLEGIPQMLATLDVYIFAENKINGEADWYGILGADPLADDETIRKQYRKLALTLHPDKNKSIGADGAFKLISEAWSLLSDKAKRVAYDQKRNIKGQKVSTKSGGTSAHPGTNGNYNFTKSATSSARAHKNTTKPHASTSTHKSKSNTFWTVCNRCKMQYEYLRVYLNLKLLCPNCHGAFLAVETAPPPASGVRPATSFSFSRQQQNFNNQVPSKNKSNTGKNKTTPNVGSGGYSNTDSYNQTDFQWAPFSRTSGVSTAAQAASVVQQAYEKVKREREEAQAATKREQALRRKQHASKKGCINPAKRRRGMEDASVSGHSKEPANQRGMRNGVVGGANSCGSKPGSFDPIWINGSSKASGERVFSQLELNNLLMVRSKNEIDKKLKEIQSNTVSKTAVKESGNVYQKTNEKGEKSLRSSETCDQNNIRKSEDRDSGSYGIRNLAETTAANIEKTTLIDIPDSDFHDFDKDRIDRSFGVNQVWATYDDDDGMPRNYAMIHSVISLSPFKMRIRWLKSKTNGEFAPLNWIASGFSKTCGVYRMGRYEINNSLNSFSHKVRWRKGAHGAICIYPMKGDVWALYRNWSPDWNELTADEVIHKYDMVEVLEDFNEEHGVVVIPLVKVAGFKTLFHRHLDPREIRIISREEMFRFSHQVPSYLHIGKEAPNAPRGCQELDPAATPSELLQVIKAVREEDMVCTEDISVEETAIDNIERSNDEEMINDMGKVRKGKEKSNKDIEEVETLEEDKEDKRENVD 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1168 792 MobiDBLite consensus disorder prediction 315 368 - -
Dere01g1168 792 PRINTS DnaJ domain signature 68 86 IPR001623 -
Dere01g1168 792 PRINTS DnaJ domain signature 86 101 IPR001623 -
Dere01g1168 792 PRINTS DnaJ domain signature 102 122 IPR001623 -
Dere01g1168 792 Gene3D DnaJ domain 63 182 IPR036869 -
Dere01g1168 792 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Dere01g1168 792 SMART dnaj_3 65 122 IPR001623 -
Dere01g1168 792 MobiDBLite consensus disorder prediction 135 182 - -
Dere01g1168 792 Pfam Domain of unknown function (DUF3444) 494 699 IPR024593 -
Dere01g1168 792 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Dere01g1168 792 MobiDBLite consensus disorder prediction 751 792 - -
Dere01g1168 792 MobiDBLite consensus disorder prediction 133 182 - -
Dere01g1168 792 Pfam DnaJ domain 66 127 IPR001623 -
Dere01g1168 792 MobiDBLite consensus disorder prediction 247 275 - -
Dere01g1168 792 SUPERFAMILY Chaperone J-domain 60 126 IPR036869 -
Dere01g1168 792 CDD DnaJ 66 119 IPR001623 -
Dere01g1168 792 Coils Coil 301 331 - -
Dere01g1168 792 PANTHER BNAC03G44070D PROTEIN 1 717 - -
Dere01g1168 792 Coils Coil 767 790 - -
Dere01g1168 792 MobiDBLite consensus disorder prediction 444 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1168 Dere-ChrDere01 23568644 23571022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1168 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.894 4.07e-32 126