Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1163 ATGGGTTTATCATCACTTCTTCTCTTTTCTCTCCTGTTTTGTCTCTCTCACCCGACCTGGGTCTGTGGGAATGAAGAGCTCAGAGCTCTCATGGACGTGAAAGCTGCTCTGGACCCAGAAAACCGTTATCTTTCTTCTTGGACTTCCAATGGGAACCCATGCGACGGTTCTTTCGAAGGACTGGCTTGCAACGAGAGGGGTCAAGTGGCTAACATATCGTTGCAGGGGAAGGGCCTCTCAGGGAAGCTCTCGCCCGCCATTGATGGGCTCAAGCACTTGACAGGGCTATACCTGCATTATAACGCCCTGTACGGTGAGATACCTAAAGAAATCGCCAATTTGACTGAGCTAACTGATTTATATCTGAATGTGAATCGTTTCACTGGGGAAATCCCTCCTGAGATCGGCAAAATGGAGAACTTGCAAGTTTTGCAGCTTTGCTATAATCAATTGAAGGGAAGCATACCTACTCAGCTTGCTGCTTTGAAGAAGCTTAGTGTTGTTGCTCTGCAGTCAAATCAATTAACTGGTGCTATTCCTGCTAGTTTAGGCGATTTGGGAATGCTAATGAGGCTAGATTTGAGTTCTAATCGCCTTTTTGGTTCCATTCCCACCAGACTAGCCGATGCTCCTTCCCTGCAAGTTTTAGACGTTCGCAACAATACTCTCTCTGGGAGTGTACCTCCTGCACTGAAGAGACTTCAAGATGGATTTTTGTATGAATACAATCTGGGATTATGTGGAGCTGGGTTTTCATCCTTAAGAACTTGCAGTGCTTCTGATCATGTCAATCCTAGTAGACCTGAACCTTATGGAGCTGGCATAGATGGTCTACCAACGAGGGATATTCCGGAAACTGCAAATGTTCATTTGCCCTGCAATGGAACTCAGTGCCATAGGTCATCAAAATCCAAACAAACAACATCTATAACTGTTGGCATAATAGTGGTTACAATTGCAGTGTCAGCAATTGGCATTCTAACCTTCACACAATATCGCCGGCGAAAACAAAAGCTTGCAAATTCCTTTGAAGTCTCTGATAGCCGTCTAAGTACTGATCAAGCCAAGGCTATTTACAGGAAAAATGGGTCTCCTTTAATCAGTCTTGAGTACTCCAATGGATGGGACCCTCTGGCTGATAGCCGGAATTTCAATGGGTATAGCCAAGACATGTTCCAAAGTTTCAGGTTCAACCTGGAAGAGGTGGAAACTGCAACTCAGTATTTCTCGGAGTTGAATTTGTTAGGGAAGAGTAACTTTAGTGCAACATATAAAGGAGTGTTAAGAGATGGGTCTGTAGTTGCTGTGAAGAGCATCAGCAAAAGTAGTTGCAAGTCAGATGAAGCTGAGTTTTTGAAGGGGTTGAACATTTTGACATCACTAAGGAACGAGAATCTAGCGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGCGAGTGCTTTCTGATTTATGATTTCGTTCCTAATGGTAACTTGTCGCAGTACTTTGATGTTAAGGAAGGTGAAAGAGAAGTCCTTGAATGGTCAACCAGAGTTTCTATTGTGAAAGGAATTGCCAAGGGCATAGCATACCTACATGCACACAAAGCAAACAAGCCTGCACTAGTTCATCAAAACATCTCAGCTGAGAAAGTGCTCATTGATCAGCGATTCAACCCACTGCTTTTGGACTCTGGCCTCAGCAAGATCTTTACTAATGACATCGTCTTCTCGGCGCTCAAGGCTAGTGCAGCGAAGGGTTATCTAGCTCCAGAATACACCACCACTGGCCGGTTCACTGAGAAAAGTGATGTGTATGCTTTTGGAGTGCTGCTTTTGCAGATCCTCTCAGGGAAGCAGAAGATCACAAGCTCAATGCGCCTTGCTGCAGAATCCCTGAGGTTCCAAGAATTCATGGACCCGAATCTGCATGGCAGATTCTTCGAGTACGAGGCAGCTAAGCTCTCGAAAATGGCTTTGCTTTGCTCTCATGAGTCTCCTTTTGAGAGGCCATCCATGGAAGCCATTGTTCAAGAGCTAGGCAATTGTAGTAGCTGTTTCTGA 2046 0.4497 MGLSSLLLFSLLFCLSHPTWVCGNEELRALMDVKAALDPENRYLSSWTSNGNPCDGSFEGLACNERGQVANISLQGKGLSGKLSPAIDGLKHLTGLYLHYNALYGEIPKEIANLTELTDLYLNVNRFTGEIPPEIGKMENLQVLQLCYNQLKGSIPTQLAALKKLSVVALQSNQLTGAIPASLGDLGMLMRLDLSSNRLFGSIPTRLADAPSLQVLDVRNNTLSGSVPPALKRLQDGFLYEYNLGLCGAGFSSLRTCSASDHVNPSRPEPYGAGIDGLPTRDIPETANVHLPCNGTQCHRSSKSKQTTSITVGIIVVTIAVSAIGILTFTQYRRRKQKLANSFEVSDSRLSTDQAKAIYRKNGSPLISLEYSNGWDPLADSRNFNGYSQDMFQSFRFNLEEVETATQYFSELNLLGKSNFSATYKGVLRDGSVVAVKSISKSSCKSDEAEFLKGLNILTSLRNENLARLRGFCCSRGRGECFLIYDFVPNGNLSQYFDVKEGEREVLEWSTRVSIVKGIAKGIAYLHAHKANKPALVHQNISAEKVLIDQRFNPLLLDSGLSKIFTNDIVFSALKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLLQILSGKQKITSSMRLAAESLRFQEFMDPNLHGRFFEYEAAKLSKMALLCSHESPFERPSMEAIVQELGNCSSCF 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1163 681 ProSiteProfiles Protein kinase domain profile. 409 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1163 681 Gene3D Transferase(Phosphotransferase) domain 1 488 680 - -
Dere01g1163 681 FunFam Leucine-rich repeat receptor-like kinase 25 134 - -
Dere01g1163 681 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Dere01g1163 681 SUPERFAMILY Protein kinase-like (PK-like) 384 674 IPR011009 -
Dere01g1163 681 Gene3D Ribonuclease Inhibitor 20 262 IPR032675 -
Dere01g1163 681 FunFam Protein NSP-INTERACTING KINASE 2 488 678 - -
Dere01g1163 681 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 79 675 - -
Dere01g1163 681 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Dere01g1163 681 FunFam Protein NSP-INTERACTING KINASE 2 136 258 - -
Dere01g1163 681 Pfam Protein tyrosine and serine/threonine kinase 413 674 IPR001245 GO:0004672|GO:0006468
Dere01g1163 681 FunFam Protein NSP-INTERACTING KINASE 2 380 487 - -
Dere01g1163 681 SUPERFAMILY L domain-like 22 234 - -
Dere01g1163 681 Gene3D Phosphorylase Kinase; domain 1 379 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1163 Dere-ChrDere01 23511590 23515062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1163 3 522 Miscellaneous Gene Families AT4G22730 56.333 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Dere01g1163 PK_Tyr_Ser-Thr 4.6e-35 CL0016