Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1152 ATGGCTGTGGCTTTTATGGCTCCTCTGAAAGCAACAACTTGTGCTCACAGGTGTTCACGGAAGATCGCTGAATTAATATTGAAGAATGACATTGTATCATCATCATTAATTGATGATCAAGATTTAACAGTAATAGCTAAAAGTAAAGCTAACAACTCAGACTTTGAGATCAAGATAATTGCTGAGGCCTCCATTATTGAATCAGATGCTTCGGATTATTATAAGAAAAAGAGGTGCAAGTGCTGCAACAAGAAGGTTGGATTGTCAAGGTTTGAATGCAGATGTAGGGACTTATTATTGGGAAGGCATAGACACCCAGAAGAGCATTCTTGCACTAGGGATTATAAGCAAATTGGCCGTCAACAGTTGCTCAAACAAAATTCTATTTGTGAGGCTAACAAATTGAATAGGAGACTCTAA 420 0.3786 MAVAFMAPLKATTCAHRCSRKIAELILKNDIVSSSLIDDQDLTVIAKSKANNSDFEIKIIAEASIIESDASDYYKKKRCKCCNKKVGLSRFECRCRDLLLGRHRHPEEHSCTRDYKQIGRQQLLKQNSICEANKLNRRL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1152 139 SMART AN1_Zf_4 79 116 IPR000058 GO:0008270
Dere01g1152 139 Gene3D - 60 134 IPR035896 -
Dere01g1152 139 ProSiteProfiles Zinc finger AN1-type profile. 73 119 IPR000058 GO:0008270
Dere01g1152 139 PANTHER AN1-TYPE ZINC FINGER PROTEIN 61 137 - -
Dere01g1152 139 SUPERFAMILY AN1-like Zinc finger 74 132 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1152 Dere-ChrDere01 23355825 23356244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1152 61 137 C2H2 Transcription Factor Family AT3G52800 37.662 2.15e-15 67.4