Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1146 ATGTGTTCACGGAAGATCGCTGAATTAATATTGAAGAATGACATTGTATCATCATCATTAACTGATGATCAAGATTTAACAGTAATAGCTAAAAGTAAAGCTAACAACTCAAACTCTGAGACCAAGATAATTGCTGAGGCCTCCATTATTGAATCAGATGCTTCGGATTATTATAAGGAAAAGAGGTGCAAGTGCTGCAACAAGAAGGTTGGATTGTCAAGCTTTGGATGCAGATGTGGGAAGTTATTATGGGGAAGGCATAGATACCCAGAAGAGCATTCATGCAGTATGGATTATAAGCAAATTGCCGTCAACAGTGGCTCAAACAAAATTCTATTTGTGAGGCTGACAAATTAA 357 0.3725 MCSRKIAELILKNDIVSSSLTDDQDLTVIAKSKANNSNSETKIIAEASIIESDASDYYKEKRCKCCNKKVGLSSFGCRCGKLLWGRHRYPEEHSCSMDYKQIAVNSGSNKILFVRLTN 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1146 118 PANTHER AN1-TYPE ZINC FINGER PROTEIN 30 103 - -
Dere01g1146 118 SUPERFAMILY AN1-like Zinc finger 56 103 IPR035896 -
Dere01g1146 118 Gene3D - 30 108 IPR035896 -
Dere01g1146 118 ProSiteProfiles Zinc finger AN1-type profile. 57 103 IPR000058 GO:0008270
Dere01g1146 118 SMART AN1_Zf_4 63 100 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1146 Dere-ChrDere01 23243700 23244056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1146 45 100 C2H2 Transcription Factor Family AT3G52800 44.643 2.77e-13 60.8