Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1135 ATGCCTGCCCTCTACTCGTCTTCCTTTCTGACTGTGCAAAATCAAAACCCAATGTCTGTTTTCTGTCCCAGTGAGGAAGGCGAGAAAATGAAACTGTTTAGACATGAGTTTGATAAAAGGATGGGCTCTGTGGTTATGGCAAAACCGCATGACTTGAACGGCAAACAGTTACGCGGTCGTGATCGTTTCAACTACGTAGATAAGTCTGCTTTTTCTACTACTCATCGTATTTTCCAGTTTCGGGTTCCAGGTCGTTTTTCGGTGGATACTCTGGAAATCAGCTGCGCTAAGTTACTGAAACATCTTCTACATCAAATGTGGGATTTGTATGATAACCAGCTATATGGGGATGTGCCTTTCTCCTTATCAAGGCTAAAGCAATTGCAGTTTTTGAATTTTAGGAATAATAAGTTGACTGGTCCTATCCCATCAACATTGACCCAAATTCCGAACTTGAAAACGCTTGACCTTGCTCGAAACCGTCTTACTGATGAGATACCAAGACAGCTATATTGGAATGAAGTTCTGCAATATCTAGGGTTGCAAAGGAACTCTCTGAGTGGCACTCTGTCCCCTGACATGTGTCAGTTAACTGGTTTGTTGGTATATGTGAGTACTCCACCATTGGCAGCCAAGGTTAATAGCTTTTTGCCTAGGTCACTTCAAGGTAATAGGCTAACTGGGAAGATCCCGGAGGTGATTGGTTTGATGCAAGCACTTGCTCTCTTACGGAGAAGACGGAGGGAGGTTCAGGAGGAACAGACCCCATATAGTTCTTGTCGTATCAATAAAAGCAATTCACGGCGCTATGACCATGCCGCCTACATACTTGACAGAACAACTTTGCGAAAATGGGCTGATGAAGGTCAATCCAGGCTTCTGGGAAGAAGGAGCAACAGTGGTAGTCGCGGCAGTGCCAGAAGAAGCGGAATCTGTGGTAGCTATGGCGTTAGCCTACGTCGCTCTGATACCAAGCCAGAGAGAACAGAGTGTACTGAGAGTTCTGTACTCTCATCTCCTAACTCTGGCAAGCTGTACCTCCATGGAAACTTGCTTTCTGGTGTTATACCACCAGAACTTGGCAATTTGTCTAAATTAAGTTACCTGAATCTTGCCAACAATAATCTAGAAAGACCAATTCCACATAACATCAGCTCTTGCATTGCCTTGAATCAGCTCAACGTGCATGGTAATTACTTGAGTGGATCCATTACCCTGAGTTTTAGAAGCCTTAAGAGTTTGACTTACCTAAATCTCTCTGCTAACAACTTTGTAGGGAGCATACTGGTTGAACTGGGCCATATCTTAAATCTTGATACACTGGATATTTCGGGCAATAATTTTTCAGGCACAGTGCCAGCATCTGTTGGTGACCTAGAGCATCTTTTGACTCTGATACTGAACAACAATGTCTTGTGTGGGAAAATTCCTGATCAGCTAACGAATGGCCTGAGTCTTTCCTCCTTAAATGTCTCTTACACTAATTTATCTGGAATTATTTCTCCTATGGAAAATTTTTCACGATTTTCAGTTGACAGCTTCATTGGAAATCCTTTATTATGTGGAAAAAAGTTAGGTTCATTGTGTGGTTCTTACATGCCAAAATCCAAAGGTCCCCCTAAACTTCTTGTTCTTCATATGGATATGGCAATTCATACCTTAGATGATATAATGAGAGTTACTGAGAATCTCCGTGAGAAATATATCATAGGGTATGGTGCCTCTAGTACAGTATACAAGTGTAGTTTGAAAGGTTCCCAACCAATTGCAATTAAGCGACTTTACAACCAGAATCCTCAAAATTTGCAAGAGTTTGAAACAGAACTAGAGACTATTGGCAGTATCAGACATAGAAACCTTGTCACCTTGCATGGTTATGCGCTAACTCCAAATGGACATCTCCTTTTCTATGACTATATGGAGAATGGCTCTCTATGGGATCCTCTTCATGGTCCCTTGAAGAAGGTAAAACTTGATTGGGAAACACGCTTGAGGGCCTGGTTAGAATGGGAAATTTATCTTATGCATCTAATTATGAGTGTTATCAGCATGTGCTAA 2058 0.4189 MPALYSSSFLTVQNQNPMSVFCPSEEGEKMKLFRHEFDKRMGSVVMAKPHDLNGKQLRGRDRFNYVDKSAFSTTHRIFQFRVPGRFSVDTLEISCAKLLKHLLHQMWDLYDNQLYGDVPFSLSRLKQLQFLNFRNNKLTGPIPSTLTQIPNLKTLDLARNRLTDEIPRQLYWNEVLQYLGLQRNSLSGTLSPDMCQLTGLLVYVSTPPLAAKVNSFLPRSLQGNRLTGKIPEVIGLMQALALLRRRRREVQEEQTPYSSCRINKSNSRRYDHAAYILDRTTLRKWADEGQSRLLGRRSNSGSRGSARRSGICGSYGVSLRRSDTKPERTECTESSVLSSPNSGKLYLHGNLLSGVIPPELGNLSKLSYLNLANNNLERPIPHNISSCIALNQLNVHGNYLSGSITLSFRSLKSLTYLNLSANNFVGSILVELGHILNLDTLDISGNNFSGTVPASVGDLEHLLTLILNNNVLCGKIPDQLTNGLSLSSLNVSYTNLSGIISPMENFSRFSVDSFIGNPLLCGKKLGSLCGSYMPKSKGPPKLLVLHMDMAIHTLDDIMRVTENLREKYIIGYGASSTVYKCSLKGSQPIAIKRLYNQNPQNLQEFETELETIGSIRHRNLVTLHGYALTPNGHLLFYDYMENGSLWDPLHGPLKKVKLDWETRLRAWLEWEIYLMHLIMSVISMC 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1135 685 SMART LRR_typ_2 363 387 IPR003591 -
Dere01g1135 685 SMART LRR_typ_2 459 483 IPR003591 -
Dere01g1135 685 SMART LRR_typ_2 125 148 IPR003591 -
Dere01g1135 685 SMART LRR_typ_2 149 173 IPR003591 -
Dere01g1135 685 Pfam Protein kinase domain 566 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1135 685 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 406 529 - -
Dere01g1135 685 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 535 639 - -
Dere01g1135 685 SUPERFAMILY Protein kinase-like (PK-like) 539 667 IPR011009 -
Dere01g1135 685 FunFam Leucine-rich repeat receptor protein kinase EMS1 96 193 - -
Dere01g1135 685 Gene3D Transferase(Phosphotransferase) domain 1 543 670 - -
Dere01g1135 685 SUPERFAMILY L domain-like 106 528 - -
Dere01g1135 685 ProSiteProfiles Protein kinase domain profile. 564 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1135 685 ProSitePatterns Protein kinases ATP-binding region signature. 570 592 IPR017441 GO:0005524
Dere01g1135 685 Gene3D Ribonuclease Inhibitor 329 536 IPR032675 -
Dere01g1135 685 Gene3D Ribonuclease Inhibitor 90 253 IPR032675 -
Dere01g1135 685 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 108 666 - -
Dere01g1135 685 MobiDBLite consensus disorder prediction 317 340 - -
Dere01g1135 685 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1135 Dere-ChrDere01 22970964 22982554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1135 108 665 Receptor kinase-like Gene Family AT5G07180 49.926 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Dere01g1135 Pkinase 7.6e-10 CL0016