Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1126 ATGCCATCTCGGCGATTCTCTGTGTCGCCGCCGTCTACGGTTGTTTCCGATCTATACCCACCTCCTTCTTCTCCAAATCAACCCCACCAGCAGCATCTCTTGCCTCCACTTGTTGCTTCCACCGCCACTGTTTGCTCCTTCTTCCTTGTCGTCCTCCTCTGTTTTCGCAGACTCGCCCGGAAACGAACCGCCCCTTCTTCAGATTCCGAGTCCAAGCCTCCTTATCGTTTCTCGTATTCCCTTCTCCGCCGTGCCACGTCATCCTTCTCCACCCGCCTCGGCCAGGGCGGCTTCGGCCCTGTCTACTACGGCACTCTGCCTTCGACCCGACAACCCATCGCCGTCAAGCTCATGGACTCTGCCTCTCTCCAGGGCGAGCGTGAGTTCCACAACGAGCTCTTCTTCGCTTCCAGGCTTCACTCTCAACACGTGGTCTCCGCCATCGGCTTTTCCTCTGATAGGAAGCGCCGAAGGTTCTTGCTCGTCTATGAGTTTATGCAAAATGGGAATCTCCAAGACGCACTCTTGCACCGCAAGTGCCCTGAGCTGTTGGATTGGAAGAAACGTTTTTCCGTGATCGTTGACATAGCCAAAGGGATTCAGTACCTTCACTCTTGCGACCCACCTGTGATTCATGGTGATATCAAGCCGAGTAATATTCTGTTGGACCATAATTTATCGGCGAAAATTGGGGATTTTGGGCTTGCTCGGTTGAAATCGGAACCCCAGTTGGATTTTGGGATTTTGGGCTTGGATGGTGTTGAAATGACGAAAGGTGGATTGGAGATGGAGGAGAAGAAGGGAAAGGAAGAAGAGTTAGAGAGTAATGGTGGGTCAATGGTTGACGAAACACACAGCGTGAATACTGGTGATGACGGCAGCCTAGGTGCAGAGCAATCACCCGAAGGATTTGTCAGAATACCCATATCGGAGACATCCCCGGAGACGATTGAGGCGGCAACCGCAGCGTCACCTTCGGAGGCGAATTTCACCAATGGTAGCATTCAGAGTGAGAAAAACATTTCTCTGAGTGCTAAGAAAATTGGAAAAGGGTTAAAGAGCAATTCCGTGAAGGATTGGGGGTGGAAGCAAGATAATGAGGCAGCGGCATCACCCTTGGGTGAGAATAAGAAAGTCAAGGCTTACGTGATGGAGTGGCTTAAAAAGGAGATAAACAAGGAAAGACCGAAGCGCGAATGGGTAGCAACAGCTACCTCGAGTAACGGAGCAACAGTGGGAAAGGCAGAGAAAAAGACAAGCAAGAGGCGCTTGGAGTGGTGGGCATCAATGGATGAGGAAAGCAATGCTAAAGCTTTGAAGAAGAAGAGAAGACCAGCAAGGGAATGGTGGAAGGAGGAGTATTGTGAAGAGCTTGCAAAGAAGAAGAAAAAGAAGAAGCAGCAGCAGAAGAGAAATGGAATAAGCAGTGATGATGATTGGTGCGTAAGAGACGATAATATTGATGGGGAGATGAAAATGGCCAAAAACCGTAGTAGAAAAAATAGTCGCGGTAATCTAGATTGGTGGCTAGATGGATTTAGCGGTGAACTATTTAGAGCTCGCAGGAATAGCCATGATTCTGCAAGCGGAGAAATTCCCAAGAGTGGTGGTATTAGTAGTACCCCAAGCATGAGGGGAACGGTTTGTTATGTTGCTCCAGAGTATGGGTACGGTGAAGATGTATCAGAGAAGTGTGATGTTTACAGTTTTGGGGTTCTATTGCTTGTTATAGTTTCTGGGCGGCGCCCCCTTCAGGTGACTGGTTCACCATTATCAGAGTTTCATAGAGCAAATTTACTGTCATGGGCACGCCATTGTGCACGCAATGGGAAGTTGCTCGATCTGGTTGATCAGTCTATTAAGTCATTGGATAAAGAGCAGGCACGTCTTTGCATCACAATTGCTCTGCTCTGTCTGCTTAAGTCACCTGCTCGTCGTCCTTCAATGAAAGAGGTTGCGGGAATGCTTAGTGGCGAATTGGAGCCACCCCAGTTGCCAGTTGAGTATTCACCCTCGACCCCATCTCGCTTCCCATACAAGTCTCGGAAAAAGGGTCGGTGA 2061 0.4934 MPSRRFSVSPPSTVVSDLYPPPSSPNQPHQQHLLPPLVASTATVCSFFLVVLLCFRRLARKRTAPSSDSESKPPYRFSYSLLRRATSSFSTRLGQGGFGPVYYGTLPSTRQPIAVKLMDSASLQGEREFHNELFFASRLHSQHVVSAIGFSSDRKRRRFLLVYEFMQNGNLQDALLHRKCPELLDWKKRFSVIVDIAKGIQYLHSCDPPVIHGDIKPSNILLDHNLSAKIGDFGLARLKSEPQLDFGILGLDGVEMTKGGLEMEEKKGKEEELESNGGSMVDETHSVNTGDDGSLGAEQSPEGFVRIPISETSPETIEAATAASPSEANFTNGSIQSEKNISLSAKKIGKGLKSNSVKDWGWKQDNEAAASPLGENKKVKAYVMEWLKKEINKERPKREWVATATSSNGATVGKAEKKTSKRRLEWWASMDEESNAKALKKKRRPAREWWKEEYCEELAKKKKKKKQQQKRNGISSDDDWCVRDDNIDGEMKMAKNRSRKNSRGNLDWWLDGFSGELFRARRNSHDSASGEIPKSGGISSTPSMRGTVCYVAPEYGYGEDVSEKCDVYSFGVLLLVIVSGRRPLQVTGSPLSEFHRANLLSWARHCARNGKLLDLVDQSIKSLDKEQARLCITIALLCLLKSPARRPSMKEVAGMLSGELEPPQLPVEYSPSTPSRFPYKSRKKGR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1126 686 MobiDBLite consensus disorder prediction 655 686 - -
Dere01g1126 686 PANTHER OS07G0586332 PROTEIN 1 685 IPR044576 -
Dere01g1126 686 Gene3D Transferase(Phosphotransferase) domain 1 518 663 - -
Dere01g1126 686 Gene3D Transferase(Phosphotransferase) domain 1 166 265 - -
Dere01g1126 686 Coils Coil 451 471 - -
Dere01g1126 686 MobiDBLite consensus disorder prediction 265 286 - -
Dere01g1126 686 SMART serkin_6 87 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1126 686 MobiDBLite consensus disorder prediction 1 31 - -
Dere01g1126 686 MobiDBLite consensus disorder prediction 15 29 - -
Dere01g1126 686 ProSiteProfiles Protein kinase domain profile. 87 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1126 686 FunFam Os07g0541700 protein 166 245 - -
Dere01g1126 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Dere01g1126 686 Gene3D Phosphorylase Kinase; domain 1 75 165 - -
Dere01g1126 686 SUPERFAMILY Protein kinase-like (PK-like) 66 675 IPR011009 -
Dere01g1126 686 Pfam Protein tyrosine and serine/threonine kinase 89 239 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1126 Dere-ChrDere01 22752826 22754886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1126 541 663 Receptor kinase-like Gene Family AT2G43700 31.452 2.05e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Dere01g1126 PK_Tyr_Ser-Thr 7.9e-29 CL0016