Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1106 ATGTCCCCAAAAACAACGCTGTCGTTCGTATGGTTGGCAAAACCCAATTCTCTGGTGAATGGCTCTGTTTCCCTAGTGATCAATACTCTCATTGTAAACGCTTCATTTGCTTCCAATTCCACATCACTCCTTCTCCGAGACAACGGTAATTTGACTTACGGAGACTGGACGAGCTTCTATAACCCAACGAACACCGTTCACCTAAACCAAAACATAACAGGCATTGAGCTTCATTCCAATAATGGACTTTTCAGATTTGTCAATTCTACGGATTTGATTCACAGTTCTACCTCTAATCAATACTATAACACCCCCAGTCCGTTGGTGAGCATGGGTGTCACTGGCAAGATTTATATGCAAGGATTTGGCTTCAAATATGATGGATTTGGTTATTGTTCTCTGCTACTAGATGAACTCCAACATGGCTATTGGTCTCCTGGTACAGAGAACTTCCTGTTTCTTAAAGTAGAATCCGAATCCAACATATCCAATTTCATTGGGACGACAGAAGTGTTGCAGCCATCGTGCCTTCTTATTTCCAGGGTCACTTTCTTCTGGTCTTTTCTCAAGAGGTACATCAAGTACAAAGACATGGCTACCAGTCTTGGACTCAAGTTCCTTCCCACCGGTGGTCTAAAACTATTCTTGTATTCCGAGCTCAAAGCCAACACTAATGGCTTCTCCAATCTCATTGGAAAAGGAGGGTTTGGGGATGTTTACAAAGGGGAGCTGTTGGACCACTGCGTCTTCGCCGTCAAGTGCCTCATGAATGTCACCGACAGTGACGCCGAGTTTTGGGCTGAGGTCACTACCATTGCCAGAATGCACCACCTTAACTTGATTCAATTTTGA 852 0.439 MSPKTTLSFVWLAKPNSLVNGSVSLVINTLIVNASFASNSTSLLLRDNGNLTYGDWTSFYNPTNTVHLNQNITGIELHSNNGLFRFVNSTDLIHSSTSNQYYNTPSPLVSMGVTGKIYMQGFGFKYDGFGYCSLLLDELQHGYWSPGTENFLFLKVESESNISNFIGTTEVLQPSCLLISRVTFFWSFLKRYIKYKDMATSLGLKFLPTGGLKLFLYSELKANTNGFSNLIGKGGFGDVYKGELLDHCVFAVKCLMNVTDSDAEFWAEVTTIARMHHLNLIQF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1106 283 Gene3D Phosphorylase Kinase; domain 1 204 283 - -
Dere01g1106 283 ProSiteProfiles Protein kinase domain profile. 225 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g1106 283 SUPERFAMILY Protein kinase-like (PK-like) 206 283 IPR011009 -
Dere01g1106 283 PANTHER OS07G0415500 PROTEIN 121 282 - -
Dere01g1106 283 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1106 Dere-ChrDere01 22384936 22386286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1106 213 283 Trihelix Transcription Factor Family AT1G26150 55.405 4.67e-15 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere01g1106 None None None