Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere01g1089 | ATGGCGTTGGGTGTGCCTGCCCTTCCATTCACCTTCGTGGTGCACCTTCTGGGCATCGCTGCTATTATCATGGTCTTGATTTGGAACATAGACTTCAGGGGTGGCTTGGCTTGGGAATCCTCCAACAAGAGCCTCATCTTCAACATCCATCCAGTTCTTATGATAATTGGCTTAGTTGTTATCGGAGGTGAAGCTATAATAAGTTACAAATCTCTTCCACTGAAGAAGGAGGTGAAGAAACTGATACATCTTATTCTGCATGCCATCGCACTAATACTTGGAATCATCGGAATCTATTGTGCCTTCAAATTCCATAATGAAAGTGGGATTGCCAATTTATACAGCTTGCATTCCTGGCTTGGAATTGGGACAATTGCCCTTTATGGCATTCAGTGGCTCTATGGGTTTGTGATATTCTTCTACCCCGGAGGGAATTCATCACTTAGACGCGAGTCACTTCCTTGGCATGTGCTATTTGGGCTGATAGTGTATGTGTTGGCTGTTGGCACTGCTGTTCTTGGGTTTCTGGAGAAGCTCACTTTCCTTGAGAACTCTGGATTGGCAAAATATGGTTCTGAGGCATTCCTTGTGAACTTCACTGCTTTGGTCACTATCCTATTTGGTGCTTTTGTTTTATTATCTGCTATTTCTCAGGCTCCTTCGGCCGATGATGATTATGCACCCCTATAG | 690 | 0.4435 | MALGVPALPFTFVVHLLGIAAIIMVLIWNIDFRGGLAWESSNKSLIFNIHPVLMIIGLVVIGGEAIISYKSLPLKKEVKKLIHLILHAIALILGIIGIYCAFKFHNESGIANLYSLHSWLGIGTIALYGIQWLYGFVIFFYPGGNSSLRRESLPWHVLFGLIVYVLAVGTAVLGFLEKLTFLENSGLAKYGSEAFLVNFTALVTILFGAFVLLSAISQAPSADDDYAPL | 229 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere01g1089 | 229 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Dere01g1089 | 229 | CDD | Cyt_b561_ACYB-1_like | 40 | 183 | - | - | |
| Dere01g1089 | 229 | Gene3D | - | 3 | 226 | - | - | |
| Dere01g1089 | 229 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Dere01g1089 | 229 | FunFam | Cytochrome b reductase 1 | 5 | 224 | - | - | |
| Dere01g1089 | 229 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Dere01g1089 | 229 | PANTHER | CYTOCHROME B561-RELATED | 1 | 217 | IPR043205 | GO:0016491 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere01g1089 | Dere-ChrDere01 | 22083380 | 22086440 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere01g1089 | 1 | 218 | Chloroplast and Mitochondria Gene Families | AT4G25570 | 68.807 | 6.73e-109 | 313 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dere01g1089 | 01 | 22083380 | 22086440 | Dere01g1089 | 01 | 22083380 | 22086440 | ECH |