Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1070 ATGTCGACGCCGGGATTCCCAAGTGGTGGAGCATCAGAGTTCTTCGGTGGTTCCGGCAGATCCGTGGCGGCAAACACCATTAACAACCCCATAATCGCTTCCTCCAACAGCAACCTTCACCCTTTGCATCCTCTGTATAGAACTCAGCAGAACCTGCCTGCACTTTTTCTCGATCCTTCTTCGCAGATCGCTCGGCAAACCCCGAGCCTCATCGGTAAGCGCACTCTTGCAGAATTTCAAACCCACCAGAACCACAGCCAAGTTATCTCGAACCTTCTGCTTCGCTCTGTGAAACCCAGAACCTTTCAGCATGCCTCTATTTCTCCTATGTCTCATCTAACACCCATGGATTTCTCTGAATTGCCAAACTCCTCGGCTTTTACGTCACCTCGTTTTGGCATGCCCCTTCTTCAACAACTTCGGCCCCAACCCATCAATCTCCCGAACGGGACCTTATCCATGAGTAATAATTCGCTCCTGCCAAACGCTGCGTTTCCATACCCAAATTCTAATTTGGTTCAGGTTCAGAACAGGGTTCTAGCTCACGATGCTGCTGAGAAGAAAGTTATGGACCATCGGCTTCAGGAGTTGGAGAAACAACTTTTGGAGGATAATGATGAGGAAGAAGGCGATGCGGTCTCTGGGATAACAAACAGCGGGTGGCCAGAAACTATACAGAATTTGATTAGTCCTGGGCATAAACCCATTTCGTCTTCACCAACTTCATCGATAACGTCCACCACCTCATCTTCTTCCTCCGTAGCCTCCCCTGCTTCAATCTGTTCGAAGCAATCGTTAATGGAGGCTGCATCTGCAATTTCCGAAGGGAAGTCGGAGTCTGGGGCGGAGATCCTAACCCGTTTATCCCAGGTTTCAAACCCGAATGCGAATTCAGATCAGAGATTGACCGATTATATGGTTTCCGCACTGAAATCGCGGATGAACCCACAGGAAAACCCGCCTCCCATAGCAGAGCTCTTCAGCAGAGAACACGCCGAGTCGACTCAGTTACTCTTCGAATACTCTCCGTGCTTCAAGGTCGGGTTCATGGCGGCTAATCTCGCAATCCTCGAAACCGCATTAGAGGAAAAACCAGAGAACGGAAGCAAGATCCGCGTGGTTGATTTCGACATCGGAGAGGGAAATCAGTACGTGAACCTTCTCAACGCGCTGTCTTCGCGTCAGAGAGGGAAGCCAGCGACGTTAAAGATCACCGCCGTCGCAGAAAATGGCGGAGAAGAGAGGTTGAAGGCAGTGGGCGACATGCTGAGTCGAACCGCCCAACGATTCGGGATAGGCTTCGAATTCAAAGTGGTGACCCAAAGCCTCAACGAGTTGACTCGCGAGTCGCTGGGTTGCGAACCGGACGAACCGTTGGCAGTGAATTTCGCTTTCAAATTGTACAGGATGCCCGACGAGAGCGTCTCCACAGAGAACCCGCGAGACGAGCTTCTCCGGCGCGTGAAGGGTCTCTCACCGCGCGTGGTAACCCTGGTGGAACAAGAAATGAACACCAACACGGCGCCGTTTATAGCTCGAGTCGCCGAGTCGTGCTCGTACTTCGCTTCCCTGTTCGACTCAATCGACTCGACAATGCCGAGGGACAACTCGGACCGGGTCAAGTTGGAGGAGGGACTGAGTCGAAAGATGGGAAACTCGGTGGCTTGCGAAGGATGGGACCGCGTTGAGAGATGCGAGGTGTTCGGGAAGTGGAAGGCACGCATGAGCATGGCGGGGTTCCAGTTGAAGCCGATGAGTCCGAGCATCGCCGAGTCAATCAAAGCGCGACTCAACCCGGCCAACCGAGTTAACCCGGGCTTCACCGTGAAAGAAGAAAACGGCGGAATTTGCTTTGGTTGGATGGGCCGAACACTCACCGTTGCCTCTGCTTGGCGTTAA 1899 0.5261 MSTPGFPSGGASEFFGGSGRSVAANTINNPIIASSNSNLHPLHPLYRTQQNLPALFLDPSSQIARQTPSLIGKRTLAEFQTHQNHSQVISNLLLRSVKPRTFQHASISPMSHLTPMDFSELPNSSAFTSPRFGMPLLQQLRPQPINLPNGTLSMSNNSLLPNAAFPYPNSNLVQVQNRVLAHDAAEKKVMDHRLQELEKQLLEDNDEEEGDAVSGITNSGWPETIQNLISPGHKPISSSPTSSITSTTSSSSSVASPASICSKQSLMEAASAISEGKSESGAEILTRLSQVSNPNANSDQRLTDYMVSALKSRMNPQENPPPIAELFSREHAESTQLLFEYSPCFKVGFMAANLAILETALEEKPENGSKIRVVDFDIGEGNQYVNLLNALSSRQRGKPATLKITAVAENGGEERLKAVGDMLSRTAQRFGIGFEFKVVTQSLNELTRESLGCEPDEPLAVNFAFKLYRMPDESVSTENPRDELLRRVKGLSPRVVTLVEQEMNTNTAPFIARVAESCSYFASLFDSIDSTMPRDNSDRVKLEEGLSRKMGNSVACEGWDRVERCEVFGKWKARMSMAGFQLKPMSPSIAESIKARLNPANRVNPGFTVKEENGGICFGWMGRTLTVASAWR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1070 632 ProSiteProfiles GRAS family profile. 253 632 IPR005202 -
Dere01g1070 632 MobiDBLite consensus disorder prediction 217 257 - -
Dere01g1070 632 Coils Coil 187 207 - -
Dere01g1070 632 Pfam GRAS domain family 263 632 IPR005202 -
Dere01g1070 632 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 239 623 IPR005202 -
Dere01g1070 632 MobiDBLite consensus disorder prediction 202 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1070 Dere-ChrDere01 21807629 21809527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1070 46 632 GRAS Transcription Factor Family AT5G52510 52.480 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere01g1070 GRAS 2.9e-106 CL0063