Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1045 ATGATCAAACTCTTTCCCCACAGCCTTGGCTTTTCCCTAACCTGCAGCTTCACTATAAAGACGCAACGAGAAGGAATGGCTCCTAAACAGCCTAGTACGGGTTTATTTGTCGGATTGAACAAGGGTCACGTTGTGACCAAGAAGGAATTGGCTCCTCGTCCGTCAGATCGCAAAGGGAAAACCAGCAAGAGAGTGCACTTTGTGAGGAATCTTATCCGTGAAGTTGCTGGGCTTGCTCCATATGAAAAGAGGATTACTGAGCTTTTGAAGGTTGGCAAGGATAAGAGGGCATTGAAGGTTGCAAAGAGAAAGTTGGGTACCCACAAGAGGGCTAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTGCGAAAGATGAGGGCTGGTGGAGCTGGGGACAAGAAGAAGTGA 408 0.4779 MIKLFPHSLGFSLTCSFTIKTQREGMAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGLAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1045 135 FunFam 60S ribosomal protein L36 26 131 - -
Dere01g1045 135 Gene3D 60S ribosomal protein L36 24 133 IPR038097 -
Dere01g1045 135 MobiDBLite consensus disorder prediction 112 135 - -
Dere01g1045 135 Pfam Ribosomal protein L36e 33 126 IPR000509 GO:0003735|GO:0005840|GO:0006412
Dere01g1045 135 PANTHER 60S RIBOSOMAL PROTEIN L36 17 133 IPR000509 GO:0003735|GO:0005840|GO:0006412
Dere01g1045 135 MobiDBLite consensus disorder prediction 104 135 - -
Dere01g1045 135 ProSitePatterns Ribosomal protein L36e signature. 80 90 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1045 Dere-ChrDere01 21466634 21468541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1045 26 135 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 80.909 4.65e-58 174