Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1019 ATGGTATGCCGTGTGACCGCCGAGAACCTCTCTTCGGATCTGTGGGCGTGGAGAAAATATGGCCAAAAGCCCATTAAAGGCTCTCCATACCCAAGGAACTATTACAGATGCAGCAGTTCAAAAGGTTGTGTGGCCCGTAAACAAGTAGAACGGAGCAACACTGAACCAGACCTGTTCATCGTCACTTACACCGGAGACCACACGCATCCGCGACCCACTCACCGGAACTCTCTCGCGGGCAGTACCCGGAACAAACCTTCCCCGATCCGTCTGCCCGCATCGCAAGAATCTGGGTCGCCTGGCAATACCGCTAACAGGGCATCATCCTCCTCACCGCTCTCTCCGACGACTCCGTTAACGGGGGCGGCGGCGGCAAACCACGAGTGTGCGAATGAACCCGTTTCGAGCAATGACGCTGCAAGCCCCGACCCGGATAATGAGCTGGACATGGCCTGTGATGACGATGTTTTGATACCCAATATGGCGGCTTTGATGGAAAATATCTTCCTTGGTACTCATCAGATTGACGGCGAAAGCGGAAGCAGTGGCGGTGGTGGTGAAAGCGCAAGCGATAATCCTGCGGATGGGTCGTATCCGAATGTTCAACCCGGGCAGAGTCCCGCTCTGCAAAACCAGTTCTCCCATCCGAGCCGGTCTAGCCCTGGTTGA 669 0.5561 MVCRVTAENLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCVARKQVERSNTEPDLFIVTYTGDHTHPRPTHRNSLAGSTRNKPSPIRLPASQESGSPGNTANRASSSSPLSPTTPLTGAAAANHECANEPVSSNDAASPDPDNELDMACDDDVLIPNMAALMENIFLGTHQIDGESGSSGGGGESASDNPADGSYPNVQPGQSPALQNQFSHPSRSSPG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1019 222 FunFam WRKY transcription factor 22 1 65 - -
Dere01g1019 222 Gene3D WRKY domain 1 73 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere01g1019 222 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 163 IPR044810 GO:0003700
Dere01g1019 222 MobiDBLite consensus disorder prediction 174 222 - -
Dere01g1019 222 SMART WRKY_cls 11 71 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere01g1019 222 MobiDBLite consensus disorder prediction 74 121 - -
Dere01g1019 222 SUPERFAMILY WRKY DNA-binding domain 6 72 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere01g1019 222 ProSiteProfiles WRKY domain profile. 6 72 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere01g1019 222 MobiDBLite consensus disorder prediction 62 151 - -
Dere01g1019 222 Pfam WRKY DNA -binding domain 13 70 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1019 Dere-ChrDere01 21106176 21106940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1019 2 121 WRKY Transcription Factor Family AT5G52830 72.500 8.36e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere01g1019 WRKY 1.2e-25 CL0274