Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1014 ATGGCAGAGCACCAGCCGCCGCCGCCGCCACCGCAAGGCTACAAATTAACAGCCTGCTCCATCTCCTACGCCAAAACAAGCTCCACCATTTCCCCATTGCTCCAACTCTTCAAAGAATGTACTGCAGCAGCCTCACCTTCTTACATCCTCAAAGACGTCTCCCTCACCGCCTATCCCTCGCATATCCTCGCCGTCGTCGGCCCAAGCGGCGCCGGCAAGTCCACCCTCCTCGACATTCTCGCCGCCCGCACTTCTCCCACCTCCGGCACCCTCCTCCTCAACTCCTCCCCCATTAACCCTTCCTCCTTCCGCAAGCTCTCCTCCTATGTCCCCCAACACGACGCCTGCCTCCCCCTCCTCACCGTCTCCGAGACCTTCGCCTTCGCCGCCGGCCTTCTCCAGCCCAAGCCCTTCGACATCTCCTTTCTTCTTGCCGAGCTCGGGCTCACTCATTTGGCCCACACCAGGCTGGCCCATGGGCTTTCCGGCGGCGAGCGGAGGCGGGTCTCCATCGGCCTGAGCCTTCTCCACGACCCCGCCGTGCTGCTTCTGGATGAGCCCACTTCCGGCCTTGACAGTACCTCTGCTTTTAACGTCATGCAGATTCTGAAATCAATCTGCATTTCCCGTCACCGGACCATTGTGCTGTCCATTCACCAACCCAGCTTCAGGATTTTATCCACGATTGATAGAATCTTGCTTCTCTCTAAAGGATCAGTAGTTCACCATGGAACTGTGGCTTCGTTTCAGGGGTTTCTTCACTCTAATGGCTTCTCTGTTCCTCCTCAGCTTAATGCCTTGGAATATGCCATGGAAATATTGAACCAACTCGACGAGCTTGAACCCGTCGATAACAGTCCTCCTGAAGAAAGCTGTACAGGTTCTCCATCTCACAATCTATCCACCACCACCAGCAGAAAGATGATCAGATACAGGAGCTCTAGAATCCAAGAAATCTGCGCTCTGTATAGCAGATTTTGGAAGATCATTTACAGAACACGACAGTTACTCTTGACCAACACTTTAGAAGCACTTCTCGTGGGTCTCGTTCTTGGAACCATATATATCAACATCGGCTTCAATAAGGAAGGGATCGAGAAAAGGTTCGGTCTTTTTGCCTTCACTCTCACTTTCCTTCTCTCCTCCACCACAGAAACACTACCAATCTTCATCAGCGAAAGGCCAATCTTACTGAGAGAAACATCAAGTGGAGTCTACAGGCTATCCTCCTACCTCATCGCCAACACACTCGTCTTCCTCCCTTACCTACTAGCAGTTGCTGTTATCTATTCCATTCCAGTCTACTTCTTAGTGGGTCTGTGTGCTTCATGGCTTTCATTTGCTTACTTCGTTTTGGTCATATGGCTCATAGTACTAATGGCTAATTCATTCGTCCTCTTCTTGAGCTCTCTTGCACCCAACTACATTGCGGGGACTTCACTCTTGACAATGCTTCTTGCAGCCTTTTTTCTCTTCTCTGGCTACTTCATCTCCAAGCAAAGCTTACCCAAATACTGGGTGTTCATGCACTTCTTTTCAATGTACAAGTATGCTCTTGATGCGCTTCTCATCAACGAATACTCTTGCTTGGTGACGAGGTGTTTGATATGGTACAAACAGAATGATGGAGAATGTATGGTTACTGGGGCCGATGTGTTGCAGAAGAGAGGGCTCAGCGAGACACAGAGATGGACGAACGTGTATGCTTTGGCTGGCTTCTTTGTGTTGTATCGTGTGCTTTGTTTGTTGGTATTGATCAGAAGGGTTTCCAGATCCAAAACTTGA 1785 0.5036 MAEHQPPPPPPQGYKLTACSISYAKTSSTISPLLQLFKECTAAASPSYILKDVSLTAYPSHILAVVGPSGAGKSTLLDILAARTSPTSGTLLLNSSPINPSSFRKLSSYVPQHDACLPLLTVSETFAFAAGLLQPKPFDISFLLAELGLTHLAHTRLAHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFNVMQILKSICISRHRTIVLSIHQPSFRILSTIDRILLLSKGSVVHHGTVASFQGFLHSNGFSVPPQLNALEYAMEILNQLDELEPVDNSPPEESCTGSPSHNLSTTTSRKMIRYRSSRIQEICALYSRFWKIIYRTRQLLLTNTLEALLVGLVLGTIYINIGFNKEGIEKRFGLFAFTLTFLLSSTTETLPIFISERPILLRETSSGVYRLSSYLIANTLVFLPYLLAVAVIYSIPVYFLVGLCASWLSFAYFVLVIWLIVLMANSFVLFLSSLAPNYIAGTSLLTMLLAAFFLFSGYFISKQSLPKYWVFMHFFSMYKYALDALLINEYSCLVTRCLIWYKQNDGECMVTGADVLQKRGLSETQRWTNVYALAGFFVLYRVLCLLVLIRRVSRSKT 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1014 594 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 262 IPR003439 GO:0005524
Dere01g1014 594 FunFam ATP-binding cassette transporter 39 255 - -
Dere01g1014 594 Pfam ABC-2 type transporter 219 278 IPR043926 GO:0140359
Dere01g1014 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 250 IPR027417 -
Dere01g1014 594 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 37 579 - -
Dere01g1014 594 Pfam ABC transporter 50 189 IPR003439 GO:0005524
Dere01g1014 594 Gene3D - 37 278 IPR027417 -
Dere01g1014 594 SMART AAA_5 59 239 IPR003593 GO:0016887
Dere01g1014 594 Pfam ABC-2 type transporter 318 527 IPR013525 GO:0016020|GO:0140359
Dere01g1014 594 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1014 Dere-ChrDere01 21045702 21047486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1014 49 245 Calmodulin-binding Proteins AT2G36910 30.455 5.43e-17 83.2