Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0998 ATGAGGCTTGTCTTCTCATCTCTGTTCCTGCTTGTGCTCTTCTCTTATGATGCAGCTGCATATGATCCTTTGGATCCAAATGGAAACATAACGATCAAATGGGATGTCATGTCTTGGACCCCAGATGGCTTTGTGGCAACAGTAACAATGCACAACTTCCAAATGTTTCGGCACATAATGAATCCAGGGTGGACCTTGGGATGGACATGGGCGAAGAAGGAAGTGATATGGTCCATGGTAGGGGCTCAAACCACAGAGCAAGGAGACTGCTCCAAGTTCAAGGGCAATGTGCCCCACTGCTGCAAGAAGACTCCCACTGTGGTGGACCTGCTTCCTGGTGTACCCTACAACCAGCAATTCACAAACTGCTGTAAGGGTGGGGTGATCCCTGCATGGGGACAGGACCCTGCAGGCGCCATCTCTTCCTTCCAGGTCAGTGTAGGCCAAGCAGGTACGTCAAACAAGACTGTCAAGCTTCCAAAGAACTTCACCCTCTTGGCCCCAGGACCAGGCTACACTTGTGGCCCTGCAAAGGTCGTCCCTTCCACCACCTTCTTCACACCAGACAAGCGTCGCAAGACTCAAGCACTGATGACATGGAACGTAACCTGCACTTTTTCACAATTTCTGGCGAGAAAGAACCCGAGCTGTTGTGTCTCTTTATCGTCATTCTACAATGAAACAATTACGCATTGTCCATCTTGTGCCTGTGGCTGCCAGAACAAGAAGAATTGCGTCAAGAGTGAATCTAAGCTTCTTAGCAAGGCGGGGGTTCACACTCCTAAGAAAGACAATGAACCGTTGCTGCAATGTACTCATCATATGTGCCCTATCAGGGTACACTGGCATGTCAAGCTCAACTATAAGGATTATTGGCGAGTCAAGATTGCCATAACGAATTTCAATTACAGGATGAATTATTCCCTTTGGTCTCTTGCTATCCAGCATCCAAATCTTAACAATGTCACTCAAGTCTTCAGCTTCGATTACAAGCCTCTCACACCCTATGAGTCTGTCAATGATACGGGTATGTTCTACGGCATGAAATACTACAACGATCTGTTAATGGAAGCGGGGCCATCTGGGAATGTTCAATCAGAGGTGCTTCTTCGGAAGGACAAGGATACTTTCACCTTCAAGCAGGGGTGGGCATTCCCTCACAAGGTCTACTTCAATGGTGATGAATGCATGCTGCCCCCACCTGATACATACCCAATTCTCCCTAATTCTGCTCCTCTGAACCTACTTACGTTCCCAGTATTCATCTTCTCATTGCTCTTCCTGCTATCTGTTTGGTGA 1299 0.4773 MRLVFSSLFLLVLFSYDAAAYDPLDPNGNITIKWDVMSWTPDGFVATVTMHNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVIPAWGQDPAGAISSFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTTFFTPDKRRKTQALMTWNVTCTFSQFLARKNPSCCVSLSSFYNETITHCPSCACGCQNKKNCVKSESKLLSKAGVHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYSLWSLAIQHPNLNNVTQVFSFDYKPLTPYESVNDTGMFYGMKYYNDLLMEAGPSGNVQSEVLLRKDKDTFTFKQGWAFPHKVYFNGDECMLPPPDTYPILPNSAPLNLLTFPVFIFSLLFLLSVW 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0998 432 Pfam COBRA-like protein 44 207 IPR006918 GO:0010215|GO:0016020
Dere01g0998 432 PIRSF COBRA 1 432 IPR006918 GO:0010215|GO:0016020
Dere01g0998 432 PANTHER PROTEIN COBRA 9 425 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0998 Dere-ChrDere01 20761427 20765096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0998 1 428 COBRA Gene Family AT3G29810 63.991 0.0 612