Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0997 ATGACATCGAGCCCAGGTATACCCTATAACGCGCGTATTGTTGATTTCTCTACAGGTGATATAGGAATGCTTTGGGGAATCAAGTTTTACAATGATATGCTCACCCAAGATGGCCCTTCTGGTAATGATCAGGCTTCTTGTCATTTGTTTCACAATTTTAGTATAAGGAGCCGCCAGAAGTTGCTTTCTAGAATCTTTGAAACTTGGTTGATTGATGTGACTATCCTTACCCAGAACAACTCTCTGCGTTTTCTTCTTGTTTCTACTGTCTTGCACATGCTTCACTACAACAGACCTTACGGTCTGTATATTCGAATAAGTATTCGAGAAACATGGCAGTTTCTGGCGGCTTTTCCTGTTGATGCCAATGGATATGAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATGTCATAAGTTGGACTCCTGATGGTTATGTTGCTGTAGTCACTATAAACAACTTTCAACAATATCGTCATATCCCAGCACCAGGGTGGTTACTTGGATGGACATGGGCAAAGAAGGAGGTTATTTGGAGCATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCTAAGTTTAAGGGGAATATCCCTCATTGCTGTAAAAAGGACCCGACAGTTGTAGATTTACTTCCCGGAACACCTTACAATCAGCAAATTGCTAATTGCTGCAAGGGTGGGGTACTCAGCTCATGGGTGCAGGATCCAGTAAACGCAGTTGCTGCATTTCAGGTAAGTGTTGGTAGAGCTGGAACCACTAACAGAACAGTTAAAGTTCCTAAAAACTTCACCCTGAAAGCACCAGGACCAGGTTATACTTGTGGGCCAGCAAAAATTGTGAAACCCACAAAATTCATACAGCCAGACAAAAGGAGGGTGACCCAAGCACTCATGACATGGAATGTTACATGCACATATTCACAATTTCTAGCTCAGAAAAGTCCTACTTGCTGTGTCTCCCTCTCATCTTTCTACAATGATACTATTGTGCCCTGCCCAACATGTGCATGTGGCTGCCAGGGAAATTCATCTCAATCAGGGAGCTGTGTCAAGGCGAATTCACCACATATACAGTCAGTTGTTTCTGGCTCTGAAAAGAATAATTTTGCTCCTTTAGTTCATTGTACTAGACATATGTGTCCAATCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTATTGGCGCGTGAAGATTACTATTACTAATTTCAATTATAGGATGAATTATTCTGAGTGGAACTTGGTCGCTCAACATCCGAACTTTGACAATCTGACCCAACTTTTCAGTTTCAACTACAAGTCATTAACTCCATATGGATCAATAAATTTTGAAGCATCTGGTGGAATTTTTAACCCACGTTACTTCTCAACAGATGATACAGCCTTGCTTTGGGGAATTAAGTTCTACAACGATTTGCTCACACAAGCTGGCCCTTTTGGTAATGTACAATCAGAGCTACTTTTCCGAAAGGACAAGTCAACTTTTACATTTGAAAAGGGTTGGGCTTTTCCTCGGAGGATCTATTTCAATGGCGACAACTGTGTGATGCCACCACCAGATGCTTATCCAAGGTCGCCTAATTCTGGTTCCCGGCAACAGGTTTCCCTGCTTGCTTTATTGATGGGTTTCTTGGTCTCCTTGGTATATTATGCATATGTTTAG 1689 0.4198 MTSSPGIPYNARIVDFSTGDIGMLWGIKFYNDMLTQDGPSGNDQASCHLFHNFSIRSRQKLLSRIFETWLIDVTILTQNNSLRFLLVSTVLHMLHYNRPYGLYIRISIRETWQFLAAFPVDANGYEAYDPLDPNGNITIKWDVISWTPDGYVAVVTINNFQQYRHIPAPGWLLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWVQDPVNAVAAFQVSVGRAGTTNRTVKVPKNFTLKAPGPGYTCGPAKIVKPTKFIQPDKRRVTQALMTWNVTCTYSQFLAQKSPTCCVSLSSFYNDTIVPCPTCACGCQGNSSQSGSCVKANSPHIQSVVSGSEKNNFAPLVHCTRHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYSEWNLVAQHPNFDNLTQLFSFNYKSLTPYGSINFEASGGIFNPRYFSTDDTALLWGIKFYNDLLTQAGPFGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPRSPNSGSRQQVSLLALLMGFLVSLVYYAYV 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0997 562 Pfam COBRA-like protein 151 314 IPR006918 GO:0010215|GO:0016020
Dere01g0997 562 PANTHER PROTEIN COBRA 122 550 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0997 Dere-ChrDere01 20755036 20760627 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0997 126 554 COBRA Gene Family AT3G02210 74.884 0.0 686