Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0995 ATGTATGGTTTTCGTGGATCAGGTAATCTAGTCGTCTTCGAAATACTGGGCAGAAATTACACTGAAGAGATCAACTTCCTGCGTTTTCTTATCGTTTGTACTGTCTTGCACTTGCTTCACTGCGTCAGTTCAGAAGCTCATGAAGCGCTTGATCCAAATGGGAGTATCACAATCAAATGGGATGTCATGAATAGGACTGCTGATGATTATGTCAAAGACATTTCCCTGCTTGCTCTACAGATGGGGTTTATGGCAACTTGGCATATTATGCATATGTTTAATGCTATAAGATCAGTTCTAGGTTCTTCCTTGGATTTCATATCTGCTTCCTTCTTCTTGATCTTTGAATTAGTTCTTCCTCTTCTCCAGATCTTCATTGGCCTTCTTCGTCACAGATCTTTAACTGATCAAGCAACACTTACCCATATTACCTTCGCAGCAAGACTGGGATTCTATCTGATACACATGTCTTCATCCTTACCCAGATCAAGTTTCTGCGTTTTCTTATCGTTTGTACTGTCTTGCACTTGCTTCACTGCATCAGAAGCTTATGATCCGTTTGATCCAAATGGAAATATCACAATCAAATGGGATGTCATGAATTGGACTGCTGATGGTTATCTTGCAGATGTGACGATAAACAACTTTCAACAGTGTCGCCATTTCCAAGCACCAGGGTGGTCACTTCAATGGACATGGGCAAAGGAGGAGGTAATCTGGAACATGATGGGAGCACAGACCACTGAACAAGGGAATTGCCTTGAGTTTAAGGGTAATACCCCACAAAGCTGTAAAAAGAATCCCACAGTCATAGATTTACTACCCGCAACACCTTACAACCAGAAGATCCCTAATTGCTGCAAAGGTGGGGTACTCAGGCCATGGCCACAAGATGCAGTGAACTCTATTGCTGCATTTCAAGTTCGTGTTGGAAGATCTGGAACCACCAACACAACAATCAGAGTGCCTAAAAACTTCACTCTCAGAGCACCAGGACCAGGTTATACTTGTGGTCCTGCAAAATTTGTGAAAGCCACTCAGTTCATAACACCAGACAAAAGAAGGGTAACCCAAGCACTCAGTAAGTACACGAATCCTGATCAAACCTCCTACAGTACCTTACTTGCAGTTTTATGTGACAGCCCAAAATTGGCGGATTCACCACATATACAGTCTACTGCTTCCAGCTCTGGAAAGAATAGTTCTGATCATTTGGTTCAATGTTCTAGCCATATGTGCCCTGTCCAAATTCACTGGCATGTTAATCTTAACTTCACTGAGTACTGGGGTGTGAATATTACTATCACTAATTTTAACTATAGGATGAACTATTCTGAATGGAACTTGGCTGTTCAACATTCAAACTTCAACAATCTGACCCAAGTTTCCAGTTTCAACTACAAGCCAATGATTCCTTACGCAGACATAAATGATACAGCAATGCTTTGGGGAGTCAAGTTCTACAATGATATGCTCACACAAGCTGGCTCTTCTGGTAATGTACAGTCCCAGATACTTCTTCGAAAGGATAAGTCAAGTTTTACTTTTGACAAGGGATGGGCTTTTCCTCGGAGGATCTATTTCAATGGTGATAACTGTGTGATGCCACCACCATATGCTGATCCATGA 1629 0.418 MYGFRGSGNLVVFEILGRNYTEEINFLRFLIVCTVLHLLHCVSSEAHEALDPNGSITIKWDVMNRTADDYVKDISLLALQMGFMATWHIMHMFNAIRSVLGSSLDFISASFFLIFELVLPLLQIFIGLLRHRSLTDQATLTHITFAARLGFYLIHMSSSLPRSSFCVFLSFVLSCTCFTASEAYDPFDPNGNITIKWDVMNWTADGYLADVTINNFQQCRHFQAPGWSLQWTWAKEEVIWNMMGAQTTEQGNCLEFKGNTPQSCKKNPTVIDLLPATPYNQKIPNCCKGGVLRPWPQDAVNSIAAFQVRVGRSGTTNTTIRVPKNFTLRAPGPGYTCGPAKFVKATQFITPDKRRVTQALSKYTNPDQTSYSTLLAVLCDSPKLADSPHIQSTASSSGKNSSDHLVQCSSHMCPVQIHWHVNLNFTEYWGVNITITNFNYRMNYSEWNLAVQHSNFNNLTQVSSFNYKPMIPYADINDTAMLWGVKFYNDMLTQAGSSGNVQSQILLRKDKSSFTFDKGWAFPRRIYFNGDNCVMPPPYADP 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0995 542 PANTHER PROTEIN COBRA 172 376 IPR006918 GO:0010215|GO:0016020
Dere01g0995 542 Pfam COBRA-like protein 207 363 IPR006918 GO:0010215|GO:0016020
Dere01g0995 542 PIRSF COBRA 156 383 IPR006918 GO:0010215|GO:0016020
Dere01g0995 542 PIRSF COBRA 20 91 IPR006918 GO:0010215|GO:0016020
Dere01g0995 542 PIRSF COBRA 378 542 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0995 Dere-ChrDere01 20738001 20750203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0995 149 542 COBRA Gene Family AT3G02210 56.876 8.83e-177 504