Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0993 ATGGTTGCATCCGATGCAAGAGCCAATTCGTTTGGTCAGACCGAGATTAACTGGGACAAGCTAGATAAAACTAAGTTCTACGTTGTTGGAGCTGGACTCTTTACAGGTATTACAGTGGGACTCTACCCAGTTTCTGTTGTGAAAACTAGACTGCAGGTTGCTTCAAAGGATTCTATAGAGAGAAATGCATTTGCTGTTGTAAAAGGATTGCTTAAATCGGACGGCTTTCCTGGTCTTTATAGAGGCTTTGGCACAGTTATAACTGGTGCAATTCCTGCCAGAATCATATTCCTCACTGTCCTAGAGACCACAAAAGTGGCTTCCTTAAGGATTCTTGAACCATTTAAACTATCTGAAACTACTCAGGCAGCCCTAGCAAATGGAGTTGCTGGCATGACATCATCGCTTTTGGCTCAAGCAGTGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAGTATCGTGGAGGTTTAGATGTTGCTCGCAAGGTTTTAAGATCTGATGGCATCAGGGGATTGTATAGAGGGTTTGGTCTATCTGTTATGACTTATTCACCATCAAGCGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGAATCATTTGGAGATTCCTTGGACATGGTACTGAATATGAGGAAGGCTCTCCTAGTCTGAAGAAGCTGATATTAGTTCAGGCTACTGGAGGAATTATTGCTGGTGCAACTGCATCCTGCATTACAACTCCATTGGATACTATTAAGACACGGTTACAGGTGATGGGATATGAAAAGAGAAGCAGCGTGAAAAAAGTTGTTAAGGACTTAATCAACGAGGATGGTTGGAAAGGTTTATATAGAGGATTAGGTCCAAGATTTTTCAGCATGTCGGCATGGGGTACCTCAATGATATTGGCTTATGAATATCTGAAGCGCTTGTGTGCAAAAGAAGAATAG 963 0.4268 MVASDARANSFGQTEINWDKLDKTKFYVVGAGLFTGITVGLYPVSVVKTRLQVASKDSIERNAFAVVKGLLKSDGFPGLYRGFGTVITGAIPARIIFLTVLETTKVASLRILEPFKLSETTQAALANGVAGMTSSLLAQAVFVPIDVVSQKLMVQGYSGHAQYRGGLDVARKVLRSDGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRIIWRFLGHGTEYEEGSPSLKKLILVQATGGIIAGATASCITTPLDTIKTRLQVMGYEKRSSVKKVVKDLINEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKEE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0993 320 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
Dere01g0993 320 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Dere01g0993 320 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Dere01g0993 320 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Dere01g0993 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
Dere01g0993 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Dere01g0993 320 Pfam Mitochondrial carrier protein 31 105 IPR018108 -
Dere01g0993 320 Pfam Mitochondrial carrier protein 235 319 IPR018108 -
Dere01g0993 320 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Dere01g0993 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Dere01g0993 320 FunFam Mitochondrial substrate carrier family protein 27 319 - -
Dere01g0993 320 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 6 319 - -
Dere01g0993 320 Gene3D Mitochondrial carrier domain 27 320 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0993 Dere-ChrDere01 20689707 20696321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0993 16 320 Chloroplast and Mitochondria Gene Families AT5G15640 75.570 2.28e-172 479