Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0989 ATGAAAACCAAACCCTGTTTGCTTCTTCCAAAGATGAGCTTCAGTTATACTGTCTTCTTCCTCAGTTTTCCCCTGTACTCCCTTTCGATTCTTGTTCATGCTTACACTCCCGTTGATCTTTTCAGGATCAACTGTGGGTCCCACGGCTCCTCACCGGATGATGTTCGGTCATGGACCGGAGACGTCGGATCAAAATTCTTATCCAGCCAAGGCAACTCCACTGCTGCTCAAGCACTCACTCAATCTCCTTCTGCAACACAAATCCCTTACACCACAGCTCGTCTCTCTCACTCCCAATTCTCTTATTCATTCTCTGTCTCTAGAGGCCAGAAATTCATCCGCCTCTTCTTCTACCCAGCCTCGTACCCAGGTTTTGATCGCTTCAATGCCTTCTTCACAGTCAAATCTGGCGGCTTTACGTTCCTTAAGGACTTCAATGCTTCACTCACCGCCGATGCTAAGAAAGAAGATACTATCATCAGAGAATATTGCGTCAATATTGGTGATGGTGAGAGGCTCAACTTAACTTTCACTCCAAATACAACAAACCCAGATAACTATGCATTCATCAATGGAATCGAGATCGTCTCCATGCCTGACGATTTCTATTATTCCAAACCCGACGGCTTAGGACTCAAATGGGTTGGTTCGACAACCGCGTTCAACATCCTCACAAGCTTTGCCCTCGAGACAGGGTACAGGCTAAACGTTGGTGGAAGCCCAATCCCAGTAGAGAAAGATACAGGTATGCTCAGATCTTGGGATGCCGACGACGATTACGTGAAAACAGAAAGTTTTCAACCTGCTGAGTATGATACGGGCACTACGCTCAGATTCACTCTGGTTCGTAATTACACAGCACCTGGCCAAGTCTATCGAACAGAACGCTCTATGGGAAAGAATAAGACTCACAACATGAACTCTAACCTCACTTGGGTATTTCCTGTCGATGGTGGCTTCAAGTACTTTCTGAGACTCCATTTCTGTGAGCTTAATCCGGATATTAGCGATGAAAATAACAGACTTTTCAATATTTACATAGCCGACCAGTTGGCTGAGGAGAGTGCAAATGTTCTAAATTGGGGCAAGGGAAAAGGGGTTCCTGTCTATAGAGATTATGCCGTATTTGTTCCACAAGATCAGAGGAAAACTCATCTCTCACTCAAAATGCATCCGGGCACGATTTTGTCCTCTAATAGGTACGATGACGCATTCTTGAATGGACTTGAGATTTTCAAAATCAGCAATACAGAAAGTAATAATCTCGCCGGACCCAATCCTGATCCTCTTCCACCAACTTCGCCCATTTTTGATAACCTACCCCAAAAAAATTCAAAAAAAACCAGAATCCCGATGATAATTGGCGTCGTCGTTGGGCCTGTAGTTTTCATCGTCGCTTTGATTTCCTGTGTCGCATGCTTCCTCATCTGTAGTGGGAAAAAGGTCAAGGAACATTCCAAGTCCAGCGATGGAACTTCGAAGTGGGTTCCGTTTTCGTTTGCAACAACCAAATCAGGGAGCACTTCAAATGGCTCATCTCTACCGTCGGAACTATGCCGTCACTTTTCCATCGCCGAGATCAGAGCCGCCACCAACAACTTCGACGAGCTCTTCAACGTCGGAGTGGGAGGATTCGGCAACGTGTACAAGGGCTACATCGACGGCGGACAGACTCCGGTTGCGATCAAGCGGCTCAAACCGGGTTCGCAACAAGGGGTCCACGAGTTCAAGACCGAGATTGAAATGCTCTCGCAGCTTCGTCACCTTCATCTCGTACCTCTCATTGGTTACTGCAGCGAAAGCAACGAGATGATCTTGGTGTACGATTTCATGTCTCGCGGGACCCTTCGTGCCCATCTCTACAACACCGGTAACCCAGCTATTCCGTGGAGGCAACGGCTCCAGATTTGCTTAGGAGCAGCACGAGGATTGCACTACCTTCATACAGGCGCGAAGTACATGATCATCCACCGCGACGTGAAGACCACGAACATCCTGATAGATGAGAAATGGAAAGCCAAGGTTTCGGATTTCGGGCTTTCAAGAATTGGGCCCACAGGGATGTCCAAGGCCCACGTCAGCACAGTAGTGAAGGGGAGCATTGGGTATCTAGACCCGGAATACTACAAACGACAACGTTTAACGGAAAAATCCGACGTGTACTCCTTCGGAGTGGTGCTGTTCGAGGTACTGTGCGGAAGACCGCCTATAATTCGTACGGCGGAGAAGAGACAGGTGTCGCTAGCTGATTGGGCGAAGCATTGCTTTCAAACGGGGAAGCTGGCTCAGATTGTGGACCCAGCTTTGAGAGGGAGGATAGCACCGGAGTGTTTGAGGAAGTTCGGTGAGATAGCAGTGAGCTGTTTGCTCGACGATGGGACCCTGAGGCCATCAATGAACGACGTCGTTTGGGGGCTGGAGTTTGCGCTGCAGCTGCAAGAGAGTGCTGAGCAAAGGGAGAATGTGATGAGAGGAAGTGGGGAGGGAGGGAATGATAAGAGGAATGAGGATAGTGATGATGGCATGTTTAGTAGTAGTAACAGTATGGGAGTGGTTTCGGACTTTAATAAGAGCAGTGGAGTGAGCGTGACAAGCAGTGGAACCGGAGAGCATAGTCATAGCGAGAAGGAAACTGATAGGTTGATGTCTGCTTCTGCTTTCTCCGAGATTATGGACCCAAAGGGACGATGA 2691 0.4812 MKTKPCLLLPKMSFSYTVFFLSFPLYSLSILVHAYTPVDLFRINCGSHGSSPDDVRSWTGDVGSKFLSSQGNSTAAQALTQSPSATQIPYTTARLSHSQFSYSFSVSRGQKFIRLFFYPASYPGFDRFNAFFTVKSGGFTFLKDFNASLTADAKKEDTIIREYCVNIGDGERLNLTFTPNTTNPDNYAFINGIEIVSMPDDFYYSKPDGLGLKWVGSTTAFNILTSFALETGYRLNVGGSPIPVEKDTGMLRSWDADDDYVKTESFQPAEYDTGTTLRFTLVRNYTAPGQVYRTERSMGKNKTHNMNSNLTWVFPVDGGFKYFLRLHFCELNPDISDENNRLFNIYIADQLAEESANVLNWGKGKGVPVYRDYAVFVPQDQRKTHLSLKMHPGTILSSNRYDDAFLNGLEIFKISNTESNNLAGPNPDPLPPTSPIFDNLPQKNSKKTRIPMIIGVVVGPVVFIVALISCVACFLICSGKKVKEHSKSSDGTSKWVPFSFATTKSGSTSNGSSLPSELCRHFSIAEIRAATNNFDELFNVGVGGFGNVYKGYIDGGQTPVAIKRLKPGSQQGVHEFKTEIEMLSQLRHLHLVPLIGYCSESNEMILVYDFMSRGTLRAHLYNTGNPAIPWRQRLQICLGAARGLHYLHTGAKYMIIHRDVKTTNILIDEKWKAKVSDFGLSRIGPTGMSKAHVSTVVKGSIGYLDPEYYKRQRLTEKSDVYSFGVVLFEVLCGRPPIIRTAEKRQVSLADWAKHCFQTGKLAQIVDPALRGRIAPECLRKFGEIAVSCLLDDGTLRPSMNDVVWGLEFALQLQESAEQRENVMRGSGEGGNDKRNEDSDDGMFSSSNSMGVVSDFNKSSGVSVTSSGTGEHSHSEKETDRLMSASAFSEIMDPKGR 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0989 896 Gene3D - 228 416 - -
Dere01g0989 896 Gene3D - 39 199 - -
Dere01g0989 896 CDD STKc_IRAK 540 803 - -
Dere01g0989 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Dere01g0989 896 MobiDBLite consensus disorder prediction 841 869 - -
Dere01g0989 896 ProSiteProfiles Protein kinase domain profile. 534 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0989 896 Pfam Malectin-like domain 43 414 IPR024788 -
Dere01g0989 896 FunFam FERONIA receptor-like kinase 40 199 - -
Dere01g0989 896 MobiDBLite consensus disorder prediction 826 840 - -
Dere01g0989 896 FunFam Receptor-like protein kinase FERONIA 611 827 - -
Dere01g0989 896 MobiDBLite consensus disorder prediction 817 896 - -
Dere01g0989 896 Gene3D Phosphorylase Kinase; domain 1 519 610 - -
Dere01g0989 896 Gene3D Transferase(Phosphotransferase) domain 1 611 829 - -
Dere01g0989 896 Pfam Protein tyrosine and serine/threonine kinase 539 803 IPR001245 GO:0004672|GO:0006468
Dere01g0989 896 PANTHER OS03G0124300 PROTEIN-RELATED 14 483 IPR046957 GO:0004672
Dere01g0989 896 ProSitePatterns Protein kinases ATP-binding region signature. 540 563 IPR017441 GO:0005524
Dere01g0989 896 FunFam Receptor-like protein kinase FERONIA 506 610 - -
Dere01g0989 896 SMART serkin_6 534 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0989 896 SUPERFAMILY Protein kinase-like (PK-like) 509 808 IPR011009 -
Dere01g0989 896 FunFam FERONIA receptor-like kinase 227 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0989 Dere-ChrDere01 20645336 20648026 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0989 27 896 Receptor kinase-like Gene Family AT3G51550 50.336 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0989 Malectin_like 2e-39 CL0202