Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0977 ATGCCTGTGCCAAAACTGATAACACATAAGCTGCCATATTTATTAGACCGATATGGATATGTGCCACGTGGTCACCTATTCGCCATTACTTTATCTTTCAGTGCGGCGTGGTCGGTTCGATTCCAGCATCTTCTTCCTTTTCCAATTCTGCGGCTCAACAATTCTTCACGAAGCTTATTATATTCTACGCAATCAAAGCCAAAGTCTAAACCTAACAATTCAGTTCTTAATCAGAGCTTGGTATCTACAGCTCTGTGCGAACTTCTTCCTTCTCTTTCTCGAGCTGCATATTGTTTATCATATAAGGGTAGAAGAGAAATTTGGCGAACACGAGACCGAAAGGATAGCCAAACTCTGCACTGGAAAACCAACAATGAGAGACATAAGATGAATAACAACATCAGAAGTCCAAAAGAAGCAGATTTCCCATTAAAACAGGAAAATCATGACAAAGCCAAGGCTTCTACTTCATCTAGCAGCTCAACTGCACAATGGCTAAGACTGAAGGATCCAAGGATTGTTCGCATTTCGCGAGCCTTCGGAGGAAAAGATCGGCATAGCAAGGTATGCACAGTGAGAGGGTTAAGAGATAGGCGAGTCAGGCTTTCTGTACCCACGGCTATTCAGCTTTATGACCTTCAAGATAGGCTAGGGTTCAATCAGCCCAGCAAGGTTGTGGATTGGTTGCTTAATGCTGCAAAGCATGAAATTGATGAACTCCCTCCACTGCAAATTCCGCCAGGAAGCTTCAATCTGTGCCACCCATCATCTGCAATAACTTCTAATAACAATGAAGTTACTGTTAGCACTTCTCAGCCTAATGAGGGGTTTAACATCAACGAGAGTGTTCATCGCTTGGAAGGTTCAAATTCCAACATGTCAAAGTCCAAAGTCTCCGGAGAAGTGGTCACTGAGAAAACAGATTGGAATAGAAGGGAAGAGGAGAGAGAGAGTTTATTATCAAGAGCAAATCATCATCATCCTTCCTTCTTGGGTTTGTTGAATGCTATGCCACTTGGTTATAATGTTAATAGCCAATGGGAGCCTAATTCAAACGATGTTTCTCACTCAGGAAACCTTGGATTTGCAAACCCGACAGATTTACACGGCAATATTAACGTTGTACCTTTCCCAGCATTATCAACCTTGTCTTTATCAACTGGAGTAACACAGCCATATTTCCCTTCAAATATTGGGGCAATGGACATGGACCCGAGGCAGATCAATCAGTATCAGATGTTGAGCTCATCAAATTCTCAAAACCTGTTATCGAATTCTCTGGTGAGTCCTTCTGTTTATACTATGGGTCAATCGGTGAAGCCATTCAGCTTGAATATGATGACTCCCAAACTTCTTCATTCACCGAATAACAGTGGAAATGGAAGCCAATCCCGGAATAAAGCCCAGGATTATCCTTCCAAGTGA 1425 0.4239 MPVPKLITHKLPYLLDRYGYVPRGHLFAITLSFSAAWSVRFQHLLPFPILRLNNSSRSLLYSTQSKPKSKPNNSVLNQSLVSTALCELLPSLSRAAYCLSYKGRREIWRTRDRKDSQTLHWKTNNERHKMNNNIRSPKEADFPLKQENHDKAKASTSSSSSTAQWLRLKDPRIVRISRAFGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGFNQPSKVVDWLLNAAKHEIDELPPLQIPPGSFNLCHPSSAITSNNNEVTVSTSQPNEGFNINESVHRLEGSNSNMSKSKVSGEVVTEKTDWNRREEERESLLSRANHHHPSFLGLLNAMPLGYNVNSQWEPNSNDVSHSGNLGFANPTDLHGNINVVPFPALSTLSLSTGVTQPYFPSNIGAMDMDPRQINQYQMLSSSNSQNLLSNSLVSPSVYTMGQSVKPFSLNMMTPKLLHSPNNSGNGSQSRNKAQDYPSK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0977 474 ProSiteProfiles TCP domain profile. 182 240 IPR017887 -
Dere01g0977 474 MobiDBLite consensus disorder prediction 288 311 - -
Dere01g0977 474 MobiDBLite consensus disorder prediction 117 137 - -
Dere01g0977 474 MobiDBLite consensus disorder prediction 448 474 - -
Dere01g0977 474 Pfam TCP family transcription factor 182 317 IPR017887 -
Dere01g0977 474 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 136 424 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0977 Dere-ChrDere01 20464065 20466084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0977 153 413 TCP Transcription Factor Family AT3G02150 41.544 9.79e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere01g0977 TCP 2.4e-31 No_clan