Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0972 ATGGACTTCAGGTCTCGTTTGGATCCTCCAATTCCGCCTACCTATTTTGGAAATTGCATTGAGGGGCCAAAGTTTGTGGCTGAAACAAAGAACTTGCTAGGGAATGATGGGTTCGTCACTGCTCTAGAAGCCATAAGTGAAGCTTTGAAGAAACTGGAAGACGAACTGCTAAGTGGAGCAGAAAGATGGATTTCAGATATGGAAAGTTATGCCATGGATAGTAGTCTTAGAAAGTCGTCAACAGCAGGGTCTCCTCGGTTTGAGGTTTATAGTACTGATTTTGGGTGGGGAAGGCCTAAGAAGGTGGATACGGCTTCTATAGCGAAGACAGGAGCATTTTCACTTTCGCAAAGCAGGAATGACAATGGAGGAGTAGAGATTGGGTTGGTGTTGGACAAACCTAAAATGGAGGCTTTTGCTGCTCTTTTTCGTAAGGGTCTTTGA 444 0.4459 MDFRSRLDPPIPPTYFGNCIEGPKFVAETKNLLGNDGFVTALEAISEALKKLEDELLSGAERWISDMESYAMDSSLRKSSTAGSPRFEVYSTDFGWGRPKKVDTASIAKTGAFSLSQSRNDNGGVEIGLVLDKPKMEAFAALFRKGL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0972 147 SUPERFAMILY CoA-dependent acyltransferases 2 147 - -
Dere01g0972 147 Pfam Transferase family 1 140 - -
Dere01g0972 147 Coils Coil 35 62 - -
Dere01g0972 147 Gene3D - 1 147 IPR023213 -
Dere01g0972 147 PANTHER - 2 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0972 Dere-ChrDere01 20379315 20379758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0972 2 139 Monolignol Biosynthesis Gene Families AT5G48930 28.472 2.22e-11 58.5