Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0971 ATGGCGAAACCAAGCTCCGTGAATATTCTTCAAGTTTGCAAGGTGGCTCCGCCACCGGAAACAACCACCTCCACCGCCGCACCTGCAACTTCTCTTCCTCTCACCTTCTTCGACGTATTATGGCTGAGATTCCCGCCCGTTGAGCGTCTTTTCTTCTACGAATTCCCCCACTCACCATCCTCCTTCTTCGATTCCGTTCTTCCGAGACTCAAACACTCCCTCTCTCTCAATCTCAGCTACTTCCTTCCTCTTGCAGGCAACATCACATGGCCCCATGACTCCCCCACACCCATAATAACTTACGTCGCCGGCGATGCCGTCACCCTCACCGTTGCCGAATCAGACGCAGACTTCAACCATCTTTCAGGTTCTGATTTCTCTGAAGCCGAGGAAAGCCAGCCGCTCTTACCTCGCTTGACCGTCTCCGATGAACAAGCTTCTGTCATAGATCTGCAAATCACTCTGTTTCCAAACTTTGGGTTCTCTATTGGGATTACCACGCACCATGCAGCCTTGGATGGGAAATCATCCGCTTCATTTTTGAAATCATGGGCTTATTTCTGCTCAAAGCTCGGAGAATCATCATTTGATTCCTCGTTACCGGAGAATCTAATCCCTTTCTTTGACAGGTCTGTGATCAAAGACCCAAATGGGATTGCTGAGATATTTGCGAATTATTATCTAAAGAAGGGTGGACCAAACAACCGAAGCTTGATGCTGTGGGATTTGAAAATTGATCAAGAGAAGCCAATAAGGGGTACGTTCGAATTGACTCCATCCAATATTCAGAAGCTTAAGAAGTATGCAGAGTCTAAGCTGAATAATAAGAAGGTTCATCTATCAACGTTTTCAGTAACATGTGCTCATGCGTTGGACTGCTTAGTGAAAGCAGAGCAAACAAAGGAAGACAAAGCGTTGTTTATATTTAGTGTGGACTGCAGATCTCGTTTGGATCCTCCAATTCCGCCTACATATTTTGGAAATTGCATTGCGGGGTTTAAGTCTGTGGCTGAAACAAAGAGCTTGCTGGGGAATGATGGGTTCGTCGCTGCTCTAGAAGCCTTAAGTGAAACTTTGAGGAAAATGGAAGACGGAGTGCTAGGTGGAGCAGAAAGATGGATTTCAGACATGGAAACTTTTGCCACGGATAGGAGTCGTAGAAAGTTCACAACGGCAGGGTCACCTCGGTTTGAGGTTTATAGTAATGATTTTGGGTGGGGAAGGCCCAAGAAGGTGGATATGGCTTCTATAGCCAAGACAGGAGCATTCTCTCTTTCGGAAAGCAGGAATGGCAATGGAGGAATTGAGATCGGCATGGTATTGGACAAACCTATAATGGAGGCTTTTGCTGCTCTTTTTCATAAAGCCGGAAAGCCTTGCGTATCCAGATACTTGTACGATATGCGTGCTCGTGTATTGAATGAAACGTATCGTCTTTTCTGGTATGCATTTGTGGTTCCGATTCTATTTTATCTCTGCATCTCTGGCAGCAATAGTGAGGGTGACGTCATCGCCTGGGACGTAATTGGTTATGGGTGTGAGGGAGTCATGCGGCCATGTGATGTTACCTGCAAGAAGGAGGAAGTAGCTGAGAGTGACAGAGAGTGA 1608 0.4646 MAKPSSVNILQVCKVAPPPETTTSTAAPATSLPLTFFDVLWLRFPPVERLFFYEFPHSPSSFFDSVLPRLKHSLSLNLSYFLPLAGNITWPHDSPTPIITYVAGDAVTLTVAESDADFNHLSGSDFSEAEESQPLLPRLTVSDEQASVIDLQITLFPNFGFSIGITTHHAALDGKSSASFLKSWAYFCSKLGESSFDSSLPENLIPFFDRSVIKDPNGIAEIFANYYLKKGGPNNRSLMLWDLKIDQEKPIRGTFELTPSNIQKLKKYAESKLNNKKVHLSTFSVTCAHALDCLVKAEQTKEDKALFIFSVDCRSRLDPPIPPTYFGNCIAGFKSVAETKSLLGNDGFVAALEALSETLRKMEDGVLGGAERWISDMETFATDRSRRKFTTAGSPRFEVYSNDFGWGRPKKVDMASIAKTGAFSLSESRNGNGGIEIGMVLDKPIMEAFAALFHKAGKPCVSRYLYDMRARVLNETYRLFWYAFVVPILFYLCISGSNSEGDVIAWDVIGYGCEGVMRPCDVTCKKEEVAESDRE 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0971 535 Gene3D - 248 457 IPR023213 -
Dere01g0971 535 Gene3D - 2 231 IPR023213 -
Dere01g0971 535 PANTHER - 7 455 - -
Dere01g0971 535 Pfam Transferase family 25 450 - -
Dere01g0971 535 SUPERFAMILY CoA-dependent acyltransferases 255 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0971 Dere-ChrDere01 20337247 20339466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0971 7 449 Monolignol Biosynthesis Gene Families AT5G48930 27.533 1.75e-26 110