Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0970 ATGGAACATCAGAATCTGAAAATACATGAAGCATGCGAGGTTGGTCCACCACCTGAAACAACCAAGCTATCTCTGCCTCTTACCTTCCTTGATTTATTATGGTTCAAATTCCATCCTTCAGAGCGCATCTTCTTCTACTCCTTTCCTCATTCACACTCACACCACAACCACACTTCCTTCTTCTTCGAATCCTTGATCCCCACACTGAAACGTTCTCTTGCTCTCGCGCTACAGCACTTCCTCCCTTTGGCTGGTAAACTTGTTTGGCCTTCCGATTCTCAGAAACCCTTCCTCAACTACACTCCCGGCGATGGAGTCTCGCTTGTTATAGCAGAGATTGATGCAGATTTTTATCATCTCTCAGGCAAAGCCGCTCGAGAAGCCAGGGAATTTCGTCCCTTGGTGCCTCACTTGGACTCATCCGATTCTTCCGCTTCGGCTATGGCTCTTCAAGTCACTCTCTTTCCAAGCAATGGCTTCTCTATAGGCATCAGCACCCACCACGCTGTTCTTGACGGCAAGTCCTCGACCATGTTCATGAAGGCCTGGGCTTATCTCTCTCAAACCACCCAAGAAGAATCGCCATCTCGGTTGACGGAAGAACTAGAGCCATTCGTAGACAGGAGTGTCGTCAAAGATCCAAACGGACTCGATATCAGGTACTTGAACGAATGGAAATTGATAGCAGAAGCAGTTGGGTCATGCGAACGAAGCTTGAAGATTCTGTCCAACGCTTCACCACAATGTATCAATGAATTAGCCCTAGCCACGTTTGAGCTAGACCGTCAAGATATAGAGAAACTCAAGAATAGGGTTCGGTCTTTGTGGGGCGAAGTTGATGAAGTAGAACAAGAAACAGCCACAACGAAGCCTCTAAATCTGTCTACTTTCGTCGTTGCTTCTGCGTTTGTGTTTACATGCACTGGAAAAGCAGTACAAAGAAGTGGAAGCAATAACAGTAATTCTGACATTGCCTTTGGATTCTCTGCAGATTGCAGGTCTCGCATGGAGCCTCCAGTGCACTCGAACTATGTTGGTAATTGTGTGGTTCCTTGTATGATCAACACAGAAACAGAGGACTTTGTTAAGGAAGAAGGCGTAGTTATTGTGGCTAAGAAGATCCACAGTAAAGTGCGAAGGTTGGAGAAGGGGGTGCTGGATGAAGCAGATACTTTGTTTGCGAAATGGAAATCCATGGCGTCTCAAGGAGCAAGAGGCATAGGAATAGGAGGGTTTACCAGATTTGGTGTTTACAAGACTGATTTTGGATGGGGAAGGCCTGTGAAGGTGGAAATAGCAACTCTGAATGTTAATGGATTGATTACAATGGCAGAAGGAAGAGATGGAAATGGTGGAGTTGAACTTGGAGTGCTTCTCTATAAGCATGAATTGGATTTGTTTGCTTCTGTATTCCGTAAGGGCATGGAGGGTCTTTGA 1437 0.4586 MEHQNLKIHEACEVGPPPETTKLSLPLTFLDLLWFKFHPSERIFFYSFPHSHSHHNHTSFFFESLIPTLKRSLALALQHFLPLAGKLVWPSDSQKPFLNYTPGDGVSLVIAEIDADFYHLSGKAAREAREFRPLVPHLDSSDSSASAMALQVTLFPSNGFSIGISTHHAVLDGKSSTMFMKAWAYLSQTTQEESPSRLTEELEPFVDRSVVKDPNGLDIRYLNEWKLIAEAVGSCERSLKILSNASPQCINELALATFELDRQDIEKLKNRVRSLWGEVDEVEQETATTKPLNLSTFVVASAFVFTCTGKAVQRSGSNNSNSDIAFGFSADCRSRMEPPVHSNYVGNCVVPCMINTETEDFVKEEGVVIVAKKIHSKVRRLEKGVLDEADTLFAKWKSMASQGARGIGIGGFTRFGVYKTDFGWGRPVKVEIATLNVNGLITMAEGRDGNGGVELGVLLYKHELDLFASVFRKGMEGL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0970 478 Coils Coil 265 285 - -
Dere01g0970 478 Gene3D - 6 236 IPR023213 -
Dere01g0970 478 PANTHER - 6 476 - -
Dere01g0970 478 Pfam Transferase family 14 469 - -
Dere01g0970 478 Gene3D - 251 477 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0970 Dere-ChrDere01 20323081 20325246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0970 6 467 Monolignol Biosynthesis Gene Families AT5G48930 23.529 4.54e-23 99.8