Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0954 ATGGCTTACAGACGTTGCCTCTTGGTAAGAGGGAACCTTGTTGATCGGAAATTCCACCCATCTTTCAGTTATGTTCTTCATAGCAACGAACGTAAACGTGAATGCGCAGACGAAAAAACAACTACAGCAGACATGAGTTATCTTCTCCATAGAAGATCTTTTGGAAGCTCTATAAATGGCTCAACGGGTTTTGCTGCGACTTCTCACAGTATTCTTACGCCATCCTCTGGTTATTCTTTCTGCCGATATATGTCAGCGGCAGTCAATCAGGGTTCGGATAAGATTGAAGTGATGAGTGATGTAGCAGCAGATGTTCTTACAGATACTGCAACTTCACATCTTCCTGTTGTCAATGAAGTTGCAGTTGCTGCTGCTGATTCTTATTTACCTGTTAAAGCTTTGCAGTACTTGATAGATGCTGTGCATTCCTATACTGGGTTAAACTGGTGGGCAGCCATAGTTATGACAACCATCTTGATTCGAGTTGCAGCCCTTCCACTAGTGATAAATCAACAAAAGGCGACATCTAAGCTTACTCTAATAAGGCCCCATATGGAAGATATAAAGCAACAGATGCAAGATAAGGGTATGTCTGTAGTTGAAGGTCAGGAGCAGATGAAGAAGCTATTTAAGGAACACGGTGTGAGTCCATTTACTCCATTGAAGGGACTCTTTATTCAAGGTCCTATCTTTGTCAGTTTTTTCCTTGCTATAACAAACATGGCTGAAAAAATGCAATCATTCAAACATGGCGGAGCCTACTGGTTTATTGATCTTACAACTCCGGATAACTTGTACATTTTTCCTGTTCTAACTGCGTTGTCATTCTTGATAACGGTGGAGTGCAATATGCAAGAAGGCATGGAAGGAAATCCTGCTGCTGGCACCATGAAAAATATCTCTAGGGGCTTTGCTGTTCTTACCGTTCCTCTTACCATGGGATTCCACAAGGCTATATTTTGTTATTGGATTACGTCAAATTTCTTTTCGCTTATCTATGGACTCGTGCTTAAAGTTCCTGGCGTGAAGAAAACATTAGGCGTTCCTGAAATTCCTGCTGCACAACCCACCAATACTCCAGAATCTTCCTTTCCTGTCTTTCCAGCACTAAAGCGAGCTATGTTAGCCACTAATAAAACAAGCCCTTTGCAAGTTGAACCATCAAAACTTCCAGGTAAAACAATACCTTCTAATATCAGTCAAAGCCTTAGAAGTGTTGAGAAACAAGTGAAAAGAAGAAAGAAAAATAAGAAGAGGTGA 1260 0.4103 MAYRRCLLVRGNLVDRKFHPSFSYVLHSNERKRECADEKTTTADMSYLLHRRSFGSSINGSTGFAATSHSILTPSSGYSFCRYMSAAVNQGSDKIEVMSDVAADVLTDTATSHLPVVNEVAVAAADSYLPVKALQYLIDAVHSYTGLNWWAAIVMTTILIRVAALPLVINQQKATSKLTLIRPHMEDIKQQMQDKGMSVVEGQEQMKKLFKEHGVSPFTPLKGLFIQGPIFVSFFLAITNMAEKMQSFKHGGAYWFIDLTTPDNLYIFPVLTALSFLITVECNMQEGMEGNPAAGTMKNISRGFAVLTVPLTMGFHKAIFCYWITSNFFSLIYGLVLKVPGVKKTLGVPEIPAAQPTNTPESSFPVFPALKRAMLATNKTSPLQVEPSKLPGKTIPSNISQSLRSVEKQVKRRKKNKKR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0954 419 MobiDBLite consensus disorder prediction 381 419 - -
Dere01g0954 419 Pfam 60Kd inner membrane protein 149 335 IPR028055 -
Dere01g0954 419 MobiDBLite consensus disorder prediction 381 405 - -
Dere01g0954 419 NCBIfam membrane protein insertase YidC 148 336 IPR028055 -
Dere01g0954 419 CDD 5TM_Oxa1-like 146 340 - -
Dere01g0954 419 PANTHER OXA1 101 407 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0954 Dere-ChrDere01 19604378 19611372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0954 129 417 Chloroplast and Mitochondria Gene Families AT2G28800 24.333 3.98e-07 50.1