Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0946 ATGCAGGTGTGGCTCATTATGGCTACTTCTTCTTCTTCTTCTTCGTCTTCGTGGTGGCTCTTGTTTTTTGGGGTCTTGGCTGGTCTTTGTGGGTGCATTGGTTCGAGCCAGATTGGTTTGGGCTCGAGAATGGTGGCAAGCAAGGGTGAAGCTTGGGTTTCTGAGAATGGCACATTTGCGTTAGGGTTCACACCTTCAGAAACTGATGATCAGTGGCTTCTGCTGGGTGTTTGGTTCGCGAAGCTTCCTGGAGATCGAACTCTGGTTTGGTCACCTAACAGAGACTCTCCAGCATCCAAAAATGCCATCTTGGAGCTCGACATCACTGGAAACCTCGTACTCTTGGACGGACGCGTCACCCTCTGGACCTCGAACACATCTGGCATTGGCGTACAATCAGCATCCATGGAGGAATCCGGCAACTTCGTCCTCCACGCCGCCGCCAACCGCCCTGTGTGGCAGAGCTTCTCACAGCCATCCGACACCCTTCTACCAAATCAACCCTTAACTGTCTCCTCGGAACTAACGTCCTCAAAAACCGCCTCTCATGGTGGCTACTACGCCCTCAAAATGCTTCAACAACCCACTTCCTTGAGCCTTGGGCTCACTTATATTCTCCCAGATTCTGTATCGTACACCAATTACTCCTACTGGCGAGGCCCTGATATCTCCAACGTGACAGGGAATGTCACAGCAATTTTAGACCATGCAGGGAGCTTTGGGATTGTGTATGGAGATTCTTCAGATGGGGCAGTTTATGTGTACAAGAATGACAATGATGAATTGGGATTATCGTACTCCTCTCTCCAAACAACCCCATTAAGTGTTCCTAGAAGGTTGACGCTAGAAAAGAACGGAAATCTGCGTTTGTACCGTTGGGACGACGATGTGAATGGGTCAAGACAGTGGGTTTCAGAGTGGGCTGCAGTATCGAACCCATGTGATATTGCTGGAATTTGTGGTAATGGGGTTTGTAAATTAGACAGAAGTAAGACAAATGCTTCTTGTACTTGCTTGCCTGGGACTTCTGAAGTTGGTAGGGATGGCCAGTGCTATGAAAATTCCTCATTGGTCGGAAAATGCAATTCCCGACATGAAAACAAGAACCTGATGCCAACATCAGAGTTTAAGATTTCTGTAGTGCAGCAGACGAATTATTATTTTTCTGAAACTTCTGTGGTAGCAAACTACAGTGATGTTGCCACTCTGTCAAAATGTGGGGATGCTTGCTTATCAGATTGTGATTGTGTTGCTTCAGTTTATGGGCTAAATGAAGAAACACCATACTGCTGGGTGTTAAGGAGCTTGGATTTTGGAGGGTTTGAGGATACTAGCTCGACCCTATTTGTGAAGGTCAGGTCAAATGGCTCAATGACACCAGAAGGTGAAGCAGGTGGGTCTAGTAGTAGTTCTGATGACGCGTTGGGGAGTAAAAAAGAGAAGGTTGTTGTTCTTCCAATTGTTCTCAGCATGACACTTCTTATTGCCCTTCTATGTTTATTGCTATACTATAGTGTTCATCGAAAAAGAACGTTTAGAAGAGAGATGGAAAGTTCATTGATCTTATCTGGTGCTCCCATGAACTTCACCTATCGCGATTTACAAATCAGGACCTGCAACTTCTCGCAATTGCTAGGAACAGGTGGATTTGGGAGTGTGTACAAAGGAAGCCTTGGAGATGGGACACTTGTAGCAGTAAAGAAACTTGATAGGGTTTTGCCTCATGGAGAGAAAGAATTTATCACTGAAGTAAATACCATTGGCTCAATGCACCATATGAACTTGGTTCGCTTATATGGCTATTGTTCTGAGGGGTCACAGAGGCTTCTAGTCTATGAGTTTATGAAAAATGGGTCATTGGACAAATGGATCTTCCCTTCATATCAAGGACGAGATAGGTTGCTAGATTGGTCAACTCGCTTTGATATAGCTATTGCTACTGCACAAGGGATTGCATACTTCCATGAGCAGTGCAGAAATCGGATAATACATTGTGACATAAAACCAGAAAACATACTGTTAGATGAAAATTTTTGTCCCAAAGTATCTGATTTTGGGCTGGCGAAACTGATGGGAAGGGAGCACTCTCATGTGGTAACAATGGTGAGAGGGACTAGAGGTTATTTAGCACCAGAATGGGTTAGTAATCGCCCTATCACTGTAAAAGCTGATGTTTATAGCTATGGGATGCTTCTCTTAGAGATCATTGGCGGTCGGAGAAATCTTGACATGTCCTATGATGCAGAGGACTTCTTCTATCCTGGTTGGGCTTTCAAGGAGACCGCAAATGGATCACCCTTAAAGGTAGCAGATAGAAGATTAAATGGTGCAGTTGATGAAGAAGAGCTGGTGAGAGCTTTGAGAGTTGCCTTCTGGTGCATCCAAGATGAGGTTTTCATGAGACCAACAATGGGAGAAGTGGTGAGGATGCTAGAAGGGTCAATTAACATCAGTACACCACCAATGCCACAAACAGTACTAGAGTTAATTGAGGAAGGTTTAGACCAAGTGTACAGAGCTATGAAAAGAGAGTATAACCACTACAGCTCATTCACCATCACTACTCATCCTTCATCTCATGCTACTTATAGCAATTCCACAATGTCACCAAGATAG 2616 0.4476 MQVWLIMATSSSSSSSSWWLLFFGVLAGLCGCIGSSQIGLGSRMVASKGEAWVSENGTFALGFTPSETDDQWLLLGVWFAKLPGDRTLVWSPNRDSPASKNAILELDITGNLVLLDGRVTLWTSNTSGIGVQSASMEESGNFVLHAAANRPVWQSFSQPSDTLLPNQPLTVSSELTSSKTASHGGYYALKMLQQPTSLSLGLTYILPDSVSYTNYSYWRGPDISNVTGNVTAILDHAGSFGIVYGDSSDGAVYVYKNDNDELGLSYSSLQTTPLSVPRRLTLEKNGNLRLYRWDDDVNGSRQWVSEWAAVSNPCDIAGICGNGVCKLDRSKTNASCTCLPGTSEVGRDGQCYENSSLVGKCNSRHENKNLMPTSEFKISVVQQTNYYFSETSVVANYSDVATLSKCGDACLSDCDCVASVYGLNEETPYCWVLRSLDFGGFEDTSSTLFVKVRSNGSMTPEGEAGGSSSSSDDALGSKKEKVVVLPIVLSMTLLIALLCLLLYYSVHRKRTFRREMESSLILSGAPMNFTYRDLQIRTCNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLYGYCSEGSQRLLVYEFMKNGSLDKWIFPSYQGRDRLLDWSTRFDIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSYDAEDFFYPGWAFKETANGSPLKVADRRLNGAVDEEELVRALRVAFWCIQDEVFMRPTMGEVVRMLEGSINISTPPMPQTVLELIEEGLDQVYRAMKREYNHYSSFTITTHPSSHATYSNSTMSPR 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0946 871 Pfam S-locus glycoprotein domain 256 341 IPR000858 GO:0048544
Dere01g0946 871 Gene3D Transferase(Phosphotransferase) domain 1 615 827 - -
Dere01g0946 871 CDD B_lectin 47 159 IPR001480 -
Dere01g0946 871 SMART serkin_6 539 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0946 871 ProSiteProfiles Bulb-type lectin domain profile. 37 157 IPR001480 -
Dere01g0946 871 Gene3D - 36 158 IPR036426 -
Dere01g0946 871 FunFam Serine/threonine-protein kinase 39 157 - -
Dere01g0946 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Dere01g0946 871 PANTHER OS07G0415500 PROTEIN 16 823 - -
Dere01g0946 871 SUPERFAMILY Protein kinase-like (PK-like) 517 812 IPR011009 -
Dere01g0946 871 PIRSF SRK 9 862 IPR024171 GO:0004674
Dere01g0946 871 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 615 821 - -
Dere01g0946 871 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 161 IPR036426 -
Dere01g0946 871 SMART blect_4 43 159 IPR001480 -
Dere01g0946 871 Gene3D Phosphorylase Kinase; domain 1 503 614 - -
Dere01g0946 871 ProSitePatterns Protein kinases ATP-binding region signature. 545 568 IPR017441 GO:0005524
Dere01g0946 871 CDD STKc_IRAK 545 813 - -
Dere01g0946 871 FunFam serine/threonine-protein kinase PBS1-like 507 614 - -
Dere01g0946 871 Pfam D-mannose binding lectin 87 174 IPR001480 -
Dere01g0946 871 ProSiteProfiles Protein kinase domain profile. 539 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0946 871 Pfam Protein kinase domain 542 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0946 Dere-ChrDere01 19389736 19394960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0946 489 821 Receptor kinase-like Gene Family AT5G20050 42.778 2.08e-81 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere01g0946 Pkinase 2.6e-46 CL0016