Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere01g0916 | ATGATCATTTGCCTCGATCTAATGCTGCTGATTTTGCTCTTATTCACTGTAATAAAGAGGTCATCAACGAAGACATGTCAGGGCCTTGTCCGGGTACAAAGGTTTTCGAATTTGCAGGTAGTTTCTGCAATAGGGAATGGCTGTCTTGGGGTAGTCCATTTGTGCTTAGGCGTTTGGTTTTTAGAGGAGAAATTGAGGAAAACCCACACTGCTTTTCCTATCCATTGGTGGTTTCTAGAGTTTTCACAGGGGTTCACATGGCTGTTGGTGGGTTTAACAGTAAGTCTTAGGTTGAGGGATCTTTCAAAGCCATGGTTGAGGCTATTGTCTATTCTTGTCTTCTTAATTTTTGCTATTTTCGGTGTTATTTCTACTTCTTATGTCATTAGTGGGAGAGAAGTGTCCCTTAAGGTAGCTTTAGATATTATATCTTTTCTAGGGGCAATATTGTTGCTCGTATGCTCATATAAGGGATATAAGTATGAAGACATTGACAGGAACATCGATGAAAGCCTTTATGCTCCTTTAAATGGTGAGGAGTCTGTTGACATAGGTAAAACTAGTTCTCTTAACCATGTAACCCCACTTGCCAAAGCTGGATTTTTCAGCAAAATGTCGTTTTGGTGGTTGAATCCACTGATGAAAAGGGGTAAGGAGAAAACGCTTCAGGATGAAGATATCCCAAAGTTACAGGAGGCGGATCAAGCCCAAAGTTGTTATTTGGTGTTTCTGGATCACTTGAACAGACAAAAACAGAAAGACCCATCATTGCAGCCCTCGGTTTTGTGGACAATAATTTTGTGTCATTGGAGAGATATTTTGATATCTGGGTTTTTCGCATTGCTAAAGGTACTCACTATCTCTGCAGGTCCAGTGCTTCTGAATTCCTTCATATTGGTTGCCGAGGGTAAAGAGAGATTCAAATATGAAGGTTATGTATTGGCCATATCATTTTTCTTTACCAAAATCATAGAATCAGTGTCAGAAAGGCAGTGGTACTTCCGATGCAGACGCATCGGTCTAAAAGTTAGATCATTGCTTACAGCAGCCATATATAAAAAGCAATTGCGGTTATCTAATGCTTCAAGGCTGATGCATTCAGGTGGGGAGATTATGAATTATGTGACCGTAGATGCTTACAGAATTGGAGAATTCCCCTTTTGGTTTCACCAGACTTGGACAACTAGTGTTCAACTATGTATTGCATTAGTAGTTCTTTTCCATGCTGTGGGGCTAGCAACAATTGCTTCCTTGGCGGTCATAGTGCTCACTGTGCTTTCCAATACTCCACTTGCAAAGTTACAGCACAAGTATCAGAGCAAACTTATGGTGGCACAAGATGGGAGATTGAAAGCTTGTTCTGAGGCTCTTGTGAATATGAAAGTACTAAAGCTATATGCATGGGAAACCCATTTTCAGAATGCTATAGAAAACTTGAGGGAAGTGGAGCTCAAATGGTTGTCTGCATTGCAGTTAAGAAAGGCATACAACACCTTTCTCTTTTGGTCTTCACCTGTTTTGGTCTCTGCTGCTTCGTTTGTGGCATGTTACTTCCTCAAAGTTCCTTTGCATGCAAATAATGTTTTCACCTTTGTGGCAACTTTACGCCTGGTTCAAGATCCAATCAGAACTTTTGCTGATGTTATTGGGGTGGTCATTCAAGCAAAAGTAGCATTTACTCGGATTGTGAAATTCCTTGAGGCACAAGAGCTGCACAGTGCAAGTGTCAAAAAGAAGTGCACAAGTGAGAATTTCAATGGCTCCATACGAATTAAGTCAGCTGACTTCTCATGGGAAGATAATGTATCGAAGCCCACTCTAAGGAACATAAATCTAGAGGTTAAACCAGGGCAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCTGGAAAATCCACCTTATTAGCTGCAATTCTTGGAGAAGTTCCTATTACTCATGGAACTATTGAAGTTCAAGGGACGTTTGCTTATGTTTCTCAAACAGCATGGATACAGACAGGTACAATAAGGGAAAATATATTGTTTGGATCAGCTATGGATGCTCAAAGGTATCAAGAAACACTTGAAAGGTCATCCTTAGTGAAGGATCTTGAGTTGTTTCCCCATGGCGATCTCACAGAAATAGGGGAGAGAGGAGTAAACCTTAGTGGAGGTCAGAAACAGCGACTTCAACTTGCTCGTGCTCTTTATCAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACACACTGCCACAAATTTATTTAATGAATATGTCATGGATGCACTAAGAGGAAAGACAGTCTTACTTGTGACTCATCAAGTTGACTTCCTCCCAGCGTTTGATTCTATTCTGCTCATGTCTGATGGAGAAATTCGGGAAGCTGCCCCTTATCATCATCTATTGTCCTCAAGCACAGAATTTCAAGACCTTGTCAATGCTCACAAGGAGACTGCTGGTTCTGAAAGGCTTCCAGATGTGACTTCTGCTCAGAAGCGTGCAAATTCTGTTAAAGAGATTAATAAATCTTATACAGAGAAGCAGTTTAAAGCTTCAACTAGTGATCAATTAATTAAGCAAGAAGAAAGGGAAATCGGAGACACAGGGCTAAAGCCTTACTTGCAGTATCTGAATCATAACAAGGGTTATCTATACTTCGCTGTTGCTATCCTTTCCCACCTTATATTTGTGCTTGGTCAGGTGTTACAGAACTCGTGGATGGCTGCTAGTGTTGACAATCCCCATGTCAGCAATTTGCGATTGATTGTGGTGTACTTGTTGATTGGATTCTCTTCAACAAGTCTCTTGTTGGCCAGGAGTCTTAGTATAGTTGCTATGGGTCTTCGATCATCAAAGTCTTTATTTTCACAGCTACTGAACTCTCTTTTTCGTGCCCCGATGTCTTTTTATGACTCCACACCTCTGGGAAGGATACTTAGTAGGGTCTCATCTGATATGAGCATTGTTGATCTGGATGTCCCATTCAGCCTTATGTTCGCTGCTGGAGCCACTACAAATTTGTATGCTAATCTTACAGTTTTAGCAGTTGTTACTTGGCAAGTCTTGTTTATCTCTATACCGATGATTTATATGGCTTATCTCCTGCAGAAATACTACTTTTCCTCTGCAAAAGAATTGATGCGGATAAATGGCACAACAAAATCCTTTGTAGCTAATCATCTAGCAGAATCAATTGCCGGAGCTATGACAATAAGGGCTTTTGAAGAGGAGGATCGTTTCTTTGCTAAGAGTCTTGATTTAATTGATGTCAATGCTTCTCCTTTCTTCCATAATTTTGCAGCAAATGAGTGGTTGATTCAACGTTTAGAAACACTCAGTGCAGTTGTTCTTGCCTCTGCAGCACTTTGCATGGTAGTGCTTCCACCTGGGTCTTTCACCTCTGGATTTATTGGCATGGCTCTCTCTTATGGCCTTTCATTAAATTCATCCCTTGTATACTCAATTCAAAGACAGTGCATAATATCAAACTATGTAATATCAGTAGAGAGGCTGAATCAATACATGCATATACCAAGTGAGGCTCCAGTGGTCATTGAAGGAAATCGCCCTCCTGTTAATTGGCCTGTAGTGGGCAAAGTAGAAATAAATAATTTGCAGATAAGATATAGGCCTGATGCACCACTTGTACTCCGAGGGATCTCATGCACGTTTGAAGGAGGGGACAAGATTGGCATTGTTGGCAGGACAGGCAGTGGAAAGTCCACTCTCATAGGTGCCTTGTTCCGCCTCGTGGAGCCGGCAGGTGGAAAGATTATTGTTGATGGCATAGACATTTCTTCTATTGGTCTCCATGATTTGAGGTCACGTTTTGGTATCATACCACAAGATCCCACTCTTTTTAATGGCACAGTTAGATATAACTTGGACCCCTTGTGTCAACACTCTGATCATGAGATATGGGAGGTTCTTGCCAAGTGTCAGTTGCAAGAGGCTGTTCAAGAGAAAGAAGGCGGATTAGACTCTTCAGTTGTGGAAGATGGATCAAACTGGAGCATGGGACAACGGCAGCTATTCTGTTTGGGGCGTGCTCTTCTGAGGAGAAGTAGGATTTTGGTGCTTGATGAAGCAACTGCATCTATTGATAATGCCACTGATCTGATTCTGCAGAAAACTATAAGGAGTGAGTGTGCAGATTGTACTGTGATCACAGTAGCACACCGGATACCAACTGTGATGGATTGCACTAAGGTCCTCTCTATCAGTGATGGAAAATTGGTGGAGTATGATGAGCCAATGAACTTGATGAAGAGAGAAGGATCTCTGTTTGGACAGCTTGTGAAGGAATACTGGTCCCATCTTCAGTCTGCAGAATCACATTGA | 4335 | 0.4148 | MIICLDLMLLILLLFTVIKRSSTKTCQGLVRVQRFSNLQVVSAIGNGCLGVVHLCLGVWFLEEKLRKTHTAFPIHWWFLEFSQGFTWLLVGLTVSLRLRDLSKPWLRLLSILVFLIFAIFGVISTSYVISGREVSLKVALDIISFLGAILLLVCSYKGYKYEDIDRNIDESLYAPLNGEESVDIGKTSSLNHVTPLAKAGFFSKMSFWWLNPLMKRGKEKTLQDEDIPKLQEADQAQSCYLVFLDHLNRQKQKDPSLQPSVLWTIILCHWRDILISGFFALLKVLTISAGPVLLNSFILVAEGKERFKYEGYVLAISFFFTKIIESVSERQWYFRCRRIGLKVRSLLTAAIYKKQLRLSNASRLMHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSVQLCIALVVLFHAVGLATIASLAVIVLTVLSNTPLAKLQHKYQSKLMVAQDGRLKACSEALVNMKVLKLYAWETHFQNAIENLREVELKWLSALQLRKAYNTFLFWSSPVLVSAASFVACYFLKVPLHANNVFTFVATLRLVQDPIRTFADVIGVVIQAKVAFTRIVKFLEAQELHSASVKKKCTSENFNGSIRIKSADFSWEDNVSKPTLRNINLEVKPGQKVAICGEVGSGKSTLLAAILGEVPITHGTIEVQGTFAYVSQTAWIQTGTIRENILFGSAMDAQRYQETLERSSLVKDLELFPHGDLTEIGERGVNLSGGQKQRLQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYVMDALRGKTVLLVTHQVDFLPAFDSILLMSDGEIREAAPYHHLLSSSTEFQDLVNAHKETAGSERLPDVTSAQKRANSVKEINKSYTEKQFKASTSDQLIKQEEREIGDTGLKPYLQYLNHNKGYLYFAVAILSHLIFVLGQVLQNSWMAASVDNPHVSNLRLIVVYLLIGFSSTSLLLARSLSIVAMGLRSSKSLFSQLLNSLFRAPMSFYDSTPLGRILSRVSSDMSIVDLDVPFSLMFAAGATTNLYANLTVLAVVTWQVLFISIPMIYMAYLLQKYYFSSAKELMRINGTTKSFVANHLAESIAGAMTIRAFEEEDRFFAKSLDLIDVNASPFFHNFAANEWLIQRLETLSAVVLASAALCMVVLPPGSFTSGFIGMALSYGLSLNSSLVYSIQRQCIISNYVISVERLNQYMHIPSEAPVVIEGNRPPVNWPVVGKVEINNLQIRYRPDAPLVLRGISCTFEGGDKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLCQHSDHEIWEVLAKCQLQEAVQEKEGGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRSECADCTVITVAHRIPTVMDCTKVLSISDGKLVEYDEPMNLMKREGSLFGQLVKEYWSHLQSAESH | 1444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere01g0916 | 1444 | FunFam | ABC transporter C family member 10 | 257 | 570 | - | - | |
Dere01g0916 | 1444 | Gene3D | - | 1181 | 1433 | IPR027417 | - | |
Dere01g0916 | 1444 | CDD | ABC_6TM_ABCC_D2 | 880 | 1173 | IPR044726 | GO:0140359 | |
Dere01g0916 | 1444 | FunFam | ABC transporter C family member 5 | 847 | 1179 | - | - | |
Dere01g0916 | 1444 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 582 | 812 | IPR027417 | - | |
Dere01g0916 | 1444 | CDD | ABC_6TM_ABCC_D1 | 275 | 562 | IPR044746 | GO:0140359 | |
Dere01g0916 | 1444 | SUPERFAMILY | ABC transporter transmembrane region | 262 | 562 | IPR036640 | GO:0005524|GO:0016020 | |
Dere01g0916 | 1444 | ProSitePatterns | ABC transporters family signature. | 714 | 728 | IPR017871 | GO:0005524|GO:0016887 | |
Dere01g0916 | 1444 | CDD | ABCC_MRP_domain2 | 1196 | 1416 | - | - | |
Dere01g0916 | 1444 | CDD | ABCC_MRP_domain1 | 589 | 789 | - | - | |
Dere01g0916 | 1444 | Pfam | ABC transporter | 1215 | 1363 | IPR003439 | GO:0005524 | |
Dere01g0916 | 1444 | FunFam | ABC transporter C family member 10 | 572 | 825 | - | - | |
Dere01g0916 | 1444 | Pfam | ABC transporter transmembrane region | 882 | 1122 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere01g0916 | 1444 | Pfam | ABC transporter transmembrane region | 273 | 539 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere01g0916 | 1444 | Gene3D | ABC transporter type 1, transmembrane domain | 246 | 570 | IPR036640 | GO:0005524|GO:0016020 | |
Dere01g0916 | 1444 | Gene3D | ABC transporter type 1, transmembrane domain | 845 | 1179 | IPR036640 | GO:0005524|GO:0016020 | |
Dere01g0916 | 1444 | FunFam | ABC transporter C family member 3 | 1181 | 1433 | - | - | |
Dere01g0916 | 1444 | Pfam | ABC transporter | 607 | 741 | IPR003439 | GO:0005524 | |
Dere01g0916 | 1444 | SUPERFAMILY | ABC transporter transmembrane region | 871 | 1178 | IPR036640 | GO:0005524|GO:0016020 | |
Dere01g0916 | 1444 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 589 | 812 | IPR003439 | GO:0005524 | |
Dere01g0916 | 1444 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1188 | 1425 | IPR027417 | - | |
Dere01g0916 | 1444 | Gene3D | - | 584 | 818 | IPR027417 | - | |
Dere01g0916 | 1444 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 885 | 1161 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere01g0916 | 1444 | SMART | AAA_5 | 1224 | 1416 | IPR003593 | GO:0016887 | |
Dere01g0916 | 1444 | SMART | AAA_5 | 616 | 789 | IPR003593 | GO:0016887 | |
Dere01g0916 | 1444 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 274 | 554 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere01g0916 | 1444 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 197 | 1432 | - | - | |
Dere01g0916 | 1444 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1198 | 1432 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere01g0916 | Dere-ChrDere01 | 18687214 | 18693941 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere01g0916 | 402 | 1439 | Calmodulin-binding Proteins | AT2G36910 | 24.460 | 4.74e-56 | 212 |