Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0893 ATGAGGAAGACGCCGCCGCCGCCCACGGTGGACATTGGACAAGTGTCGGACTCTCCGAGGCGTGGGTCCCTCCACCGTAGGTCGCACTCCGACACTGCCTTCCGTCTCTTCTCCAGCTACGACGACCCACTTCGCTTCGACCCATTTGACTTCGACTTCTCCAACTTCCCTTGTCCGTTTCCCGACATCCCAGACGACGCCGTAGCAGCGCTGGGCGCGCCCATGGCCGTTGATTCGTCCTCTGAGGAATCCAATGGCCAGAAATCCGGGCCCCGCAGGCCGGCGCGGCCCCCTATCGGCCATCTCCGGAGCTTGTCTGTGGACTCCGATTTCTTCGACGGCATGGGACTGACCGGCGTCGATGGTGGTGCCGGCGAAAATTTCGGCGGGAAAGATTTCGTTGTGGATAGATCGGTGGTGCATCCCCGGCAGAGCATTTTCATGGATGAGCCGTCCATGGGGAATGACATGGTGAAGAAGGCCATGACCCGTGACAAGCTCGCTGAGTTAGCTCTCGTTGATCCCAAGAGAGCTAAGAGGATTCTTGCTAATAGGCAATCTGCTGCTCGATCAAAGGAGAGGAGGAATCGTTATACAAATGAGCTGGAAAAAAAGGTGCAGATACTTCAGACTGAAGCAACCACCCTCTCTGCCAAGCTTACCAAGCTTGAGAGGGAAAATGCAGGGATGAGTGCTGAGAATAAGGAGCTCAAATTGCGCGTAGAGGCTATGAAACAACAAGAAAAGCTTAGAGATGGTACGCAAGCACTCAATGAATCATTGAGGGAAGAACTGCGGCACCTCAAGATAGAACATAGCCGGAAAGCTGCTATGAAGGACAACAATTTTGCTGGGTTGCTCTCTGAATTTGCTTCCCAGTTAGCTTTTCACCAGTTGGCTAACACACCACTCCAGCCGGCTCAACAGGAGCCACAGCTCGGCACGCCTCCACCATGCTCCGATCAGCCATTCAACGCGCAGCCAGGCGGTGACTTCTCGCATTTCAACCCACATAACTAG 1020 0.5471 MRKTPPPPTVDIGQVSDSPRRGSLHRRSHSDTAFRLFSSYDDPLRFDPFDFDFSNFPCPFPDIPDDAVAALGAPMAVDSSSEESNGQKSGPRRPARPPIGHLRSLSVDSDFFDGMGLTGVDGGAGENFGGKDFVVDRSVVHPRQSIFMDEPSMGNDMVKKAMTRDKLAELALVDPKRAKRILANRQSAARSKERRNRYTNELEKKVQILQTEATTLSAKLTKLERENAGMSAENKELKLRVEAMKQQEKLRDGTQALNESLREELRHLKIEHSRKAAMKDNNFAGLLSEFASQLAFHQLANTPLQPAQQEPQLGTPPPCSDQPFNAQPGGDFSHFNPHN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0893 339 CDD bZIP_plant_RF2 177 228 IPR044759 GO:0003700|GO:0006355
Dere01g0893 339 MobiDBLite consensus disorder prediction 306 339 - -
Dere01g0893 339 MobiDBLite consensus disorder prediction 75 101 - -
Dere01g0893 339 Pfam bZIP transcription factor 176 234 IPR004827 GO:0003700|GO:0006355
Dere01g0893 339 Coils Coil 199 271 - -
Dere01g0893 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 174 237 IPR004827 GO:0003700|GO:0006355
Dere01g0893 339 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 10 312 - -
Dere01g0893 339 MobiDBLite consensus disorder prediction 1 28 - -
Dere01g0893 339 Gene3D - 175 227 - -
Dere01g0893 339 SMART brlzneu 172 236 IPR004827 GO:0003700|GO:0006355
Dere01g0893 339 SUPERFAMILY Leucine zipper domain 176 228 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0893 Dere-ChrDere01 18127462 18130243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0893 6 270 bZIP Transcription Factor Family AT1G43700 45.704 4.49e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere01g0893 bZIP_1 6.6e-08 CL0018