Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0892 ATGGCTTCCAATCAAACACCCATCGTCACGAACCAAACCAAATTCGCCCTTCAAAGCAACGACCTCGAGCAGCAGCAGCAACACATGACAGCTATGGACACCCAAACGAAGAAGGTCGACGACTTGGACTACTCAAAACGAGCGCAGTGGCTACGAGCCGCCGTCCTAGGAGCCAACGACGGGTTGGTCTCCACGGCGTCTCTGATGATGGGCGTGGGAGCAGTGAAGCAAGACATCAAGGCCATGATCCTCTCCGGGTTCGCCGGGCTCGTCGCTGGAGCTTGCAGCATGGCCATCGGCGAGTTCGTGTCCGTGTACTCGCAGTTGGACATAGAGGTGGCTCAGATGAAGAGAGAAAAAGAAAGAGCGAGTCGCAGAGGGAGAGAAGAAGATGACGAAGAAGACGATGAGGAGAAGGAGGGTTTGCCGAACCCTCTGCAAGCAGGAGCAGCATCGGCTCTGGCGTTCTCGGTGGGTGCGATGGTGCCATTACTCGCAGCGTCGTTTATCAGAGAGTATAGGGTTAGGGTTGGGGTGGTGGTGGGTTCGGTAACTGTGGCTCTGGTGGTGTTTGGGTGGTTAGGGGCTGTGTTGGGTAAGGCTCCCGTGCTGAGGTCCAGTGGGAGGGTCTTGTTCGGAGGGTGGCTAGCCATGGCTTTAACTTTTGGTCTCACCAAGTTGATTGGGTCAAGCGGGCTTTAA 702 0.5598 MASNQTPIVTNQTKFALQSNDLEQQQQHMTAMDTQTKKVDDLDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERASRRGREEDDEEDDEEKEGLPNPLQAGAASALAFSVGAMVPLLAASFIREYRVRVGVVVGSVTVALVVFGWLGAVLGKAPVLRSSGRVLFGGWLAMALTFGLTKLIGSSGL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0892 233 Coils Coil 106 133 - -
Dere01g0892 233 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 21 228 IPR008217 GO:0005384|GO:0030026
Dere01g0892 233 MobiDBLite consensus disorder prediction 118 144 - -
Dere01g0892 233 Pfam VIT family 51 132 IPR008217 GO:0005384|GO:0030026
Dere01g0892 233 Pfam VIT family 137 225 IPR008217 GO:0005384|GO:0030026
Dere01g0892 233 CDD Nodulin-21 49 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0892 Dere-ChrDere01 18082587 18083288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0892 22 233 Nodulin-like Gene Family AT3G43660 65.566 1.51e-97 281