Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0890 ATGGCTCCTTCCAATTCTTCCCTTCAAGTCGTTGAGCTCTGCACAGTCGCTCCTCCGCCATGTGCGACCGTGTCCTCTTTCCCTCTCACCTTCTTCGACTTGCTTTGGCTCAAGTTCCATCCTGTCGAGCGTCTCTTCTTCTATTCCCTTCCTCAGTTACACTCTTCTTTCTTCTTTCACACCGTTCTTCCAAAACTGAAATGCTCACTCTCCCTCACTCTCCAACACTTCCTCCCTCTCGCTGGACGCATCGTGTGGCCCTCCGATTCCTACAAACCCATCGTACAGTACACTCCTGGGGATGCTGTCTCTGTCGTTGTAGCACAGTCTGATGCTGATTTCAACACTCTCTTGAGCAATTATCCTCGGGATGCCGTAGAGTGTCGCTCTTTTGTGCCCCATTTGGATTCCTCGGACTCGCTTGCTTCAGTTATCTCACTGCAAATCACTCTCTTTCCGAACGGTGGGTTTTGTATAGGCATCTCCACACACCATGCCGTTGTTGATGGGAAATCGTCAACCATGTTCATGAAGGCTTGGGCTTATCTATGCCGAGCCCAGGGAGAAGGAGGATATGATTCGTCTTTATTGCCGGAGTTAGAGCCATTCTTAGACCGAGATGATATGACCGATCCATCTGGCCTTGAAAATTTGTACATGAAAATTTGGAATGATCTTGACAAGAGCGAGCGAAGCTTGAAGATTCTGTCAAACGTATTCCCGCCCATTTTGGACCACTCGGTTCGAGCCACGTTTGAGCTCAGACGAGAAGATTTGGAGAAGATAAGGAAAAGAATATTACAAAAGTGGGAGAATCATAAGCTAGAAGAAGAGGTAGACGAACCAAAACTGTCAACCTTCGTGCTTACAGCTGCTTATGTTTCGGTGTGCATTGCCAAAGCCTTTGAAAAAAATGAAAAGAACAGAAAGAAATTCGCTTTTGGGTTCACAGTGGATTGCAGGGCAAGGCTAGAGCCTGCAGTCCCTGAAAACTACTTTGGCAACTGCGTAGCGGCTCATATTGTAGAAGCAAATCCAGAAGAGTTTACTGAGGAAGATGGGTTAGTAATGGTAGCTCAGAGAATACATAGTAAGATAAGGAAAATAATGGTGGAGAAGCAGGGAGTGCTCGATGGAGCAGAGACAATTTTCTCTAGATTTACAGGTATGGCATCTGAGGGAGTTAAGGGTATAGGAGTAGCCGGTTCAACCCGGTTTGGGGTTTATAGGACCGACTTTGGATGGGGAAAGCCTGAGAAGGTGGAGATAGCTTCGTTGGATAGAAACATAACCATGGGGATTGCAGAGAGCAGAGATGGTAAAGGAGGGGTGGAAGTAGGGCTTGTTGTGAATAGGTTTGTGATGGATTATTTTGCTGTCCTATTTCGTACAGGGATAGAGTCTGTTTGA 1410 0.466 MAPSNSSLQVVELCTVAPPPCATVSSFPLTFFDLLWLKFHPVERLFFYSLPQLHSSFFFHTVLPKLKCSLSLTLQHFLPLAGRIVWPSDSYKPIVQYTPGDAVSVVVAQSDADFNTLLSNYPRDAVECRSFVPHLDSSDSLASVISLQITLFPNGGFCIGISTHHAVVDGKSSTMFMKAWAYLCRAQGEGGYDSSLLPELEPFLDRDDMTDPSGLENLYMKIWNDLDKSERSLKILSNVFPPILDHSVRATFELRREDLEKIRKRILQKWENHKLEEEVDEPKLSTFVLTAAYVSVCIAKAFEKNEKNRKKFAFGFTVDCRARLEPAVPENYFGNCVAAHIVEANPEEFTEEDGLVMVAQRIHSKIRKIMVEKQGVLDGAETIFSRFTGMASEGVKGIGVAGSTRFGVYRTDFGWGKPEKVEIASLDRNITMGIAESRDGKGGVEVGLVVNRFVMDYFAVLFRTGIESV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0890 469 SUPERFAMILY CoA-dependent acyltransferases 267 425 - -
Dere01g0890 469 Pfam Transferase family 20 458 - -
Dere01g0890 469 PANTHER - 8 467 - -
Dere01g0890 469 Gene3D - 245 468 IPR023213 -
Dere01g0890 469 Gene3D - 8 236 IPR023213 -
Dere01g0890 469 SUPERFAMILY CoA-dependent acyltransferases 63 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0890 Dere-ChrDere01 18039663 18041072 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0890 33 418 Monolignol Biosynthesis Gene Families AT5G48930 24.112 9.95e-19 86.3