Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0882 ATGGAAGGAAATTTATCACAAGGAGGTATAATTCCGGTGGGTGCTTCTTCTTTTGGGGGTTTTGATATTCCAGCATCGATGAGAGTTTCTCATCAATCACAGCATCCCCAATCCATTCACCACCACCAAACTCATCCACGCCAAGGGCATTCCCCAATTCATGACAGTTTTCCGCTTACCATGGGAACCTTGCAGAATTGCGACCAAACCATTTCAATGACTGACTTTAGTAAGGGAGATAGAAGCAAAAGTTCAGCGAGTGAGGAGGATGAGCCAAGCTTTACAGAAGATGGTGCTGATGGTCACAATGAAGTGGGTAGAGGGAAAAGGGGCTCGCCTTGGCATCGTGTGAAGTGGACTGATAAGATGGTGAAGCTTCTGATTACAGCTGTTTCATATATAGGCGAGGATGCAACATCTGATTGTGGTTCTGGAGGAAGAAGAAAATTTGCTGTCTTACAGAAAAAGGGTAAGTGGAAATCTATCTCTAAGGTCATGGCTGAAAGGGGTCATCATGTTTCTCCTCAGCAGTGCGAGGATAAATTTAATGATCTTAATAAGAGGTATAAAAAACTTAATGATATGCTTGGCCGGGGCACATCTTGTGAAGTTGTTGAGAACCCTGCACTTTTGGATGTAATAGACTTTCTTTCCGAGAAAGAAAAGGATGATGTTCGGAAAATATTAAGCTCAAAACACCTTTTCTATGAAGAGATGTGTTCATATCATAATTGTAATAGACTGCATCTACCCCATGATCCGGCATTGCAACGTTCACTGCAAATAGCTCTCAGAAATAGAGATGACCATGATAATGATGATGTTAGAAGGTCCCATCATGATGATATTGGTGAAGATGATCCAGATGTGGAAACTGATGAACATGATGACTTTGAAGAGAATTACACTTCTCATAGAGATAATAGAGGAATACATGGGGTATTAGGGGGATCTATGAAGAAATTGAAACAAGGACAAGGCCAAGAAGATCTGATGTTTGGAAATTGCTCAAATTCTCGGGACTATAGCAAGTGTTCTTATCCTCATGGAATGATGGTCCAATGTGATGTGAATCCAGTTTTACCTGAAAACATGAGAGCAGCATGGTTACAGAAGCAATGGATTGAATCTCGATCACTTCAATTAGAAGAACAGAAGCTACAGCTTCAGGTTGAGAAGTTGGAACTGGAGAAGCAGAGATTCAAGTGGCAGAGGTTTTGTAAGAAAAAAGACCGAGATCTGGACAAAATGAGGATGGAAAATGAGAGGATGAGACTTGAAAATGAACGTATGGCTTTGGAATTGAAGCGAAAGGAAATGGGTAGTGGCTTTAACTAG 1338 0.4111 MEGNLSQGGIIPVGASSFGGFDIPASMRVSHQSQHPQSIHHHQTHPRQGHSPIHDSFPLTMGTLQNCDQTISMTDFSKGDRSKSSASEEDEPSFTEDGADGHNEVGRGKRGSPWHRVKWTDKMVKLLITAVSYIGEDATSDCGSGGRRKFAVLQKKGKWKSISKVMAERGHHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCEVVENPALLDVIDFLSEKEKDDVRKILSSKHLFYEEMCSYHNCNRLHLPHDPALQRSLQIALRNRDDHDNDDVRRSHHDDIGEDDPDVETDEHDDFEENYTSHRDNRGIHGVLGGSMKKLKQGQGQEDLMFGNCSNSRDYSKCSYPHGMMVQCDVNPVLPENMRAAWLQKQWIESRSLQLEEQKLQLQVEKLELEKQRFKWQRFCKKKDRDLDKMRMENERMRLENERMALELKRKEMGSGFN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0882 445 MobiDBLite consensus disorder prediction 81 113 - -
Dere01g0882 445 PANTHER F16F4.11 PROTEIN-RELATED 1 441 - -
Dere01g0882 445 MobiDBLite consensus disorder prediction 74 113 - -
Dere01g0882 445 MobiDBLite consensus disorder prediction 267 285 - -
Dere01g0882 445 MobiDBLite consensus disorder prediction 267 311 - -
Dere01g0882 445 Pfam Myb/SANT-like DNA-binding domain 116 242 IPR044822 -
Dere01g0882 445 MobiDBLite consensus disorder prediction 28 61 - -
Dere01g0882 445 Coils Coil 377 404 - -
Dere01g0882 445 Coils Coil 407 439 - -
Dere01g0882 445 Gene3D - 119 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0882 Dere-ChrDere01 17895069 17896406 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere01g0882 Myb_DNA-bind_4 2.1e-23 CL0123