Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0875 ATGAAAGGGTTGAAGCAGAAGAAAGCACATCTCATGGAGATTCAGGTCAATGGTGGCACTATCGCACAGAAGGTGGACTATGCATACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTATTCCAGAAGGATGAGATGATTGACCTCATTGGTGTAACAAAAGGTAAAGGGTATGAAGGTGTTGTCACCCGATGGGGTGTTACCCGTCTTCCCCGCAAGACTCACAGGGGTCTGAGGAAGGTAGCATGTATTGGTGCCTGGCATCCTGCCAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGAACTGAGATGAACAAGAAGATTTACAAACTTGGCAAAGCTGGACAGGAGTCACACACAGCTATTACTGAGTTTGACAGGACTGAGAAAAACATAACACCAATGGGTGGCTTTCCTCACTACGGTATTGTGAAGGATGACTATGTGATGATCAAGGGATGCTGTGTTGGTCCCAAGAAGAGGGCTATCACATTGCGTCAATCCTTGCTTAAGCAGACTTCACGCCTTGCTCTGGAGGAGATCAAGCTCAAGTTTATTGACACATCTTCAAAGTTCGGGCATGGCCGCTTCCAGACAACACAGGAGAAGCAAAAGTTCTTTGGACGTCTCAAGGCATAA 660 0.4667 MKGLKQKKAHLMEIQVNGGTIAQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHTAITEFDRTEKNITPMGGFPHYGIVKDDYVMIKGCCVGPKKRAITLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0875 219 Pfam Ribosomal protein L3 1 200 IPR000597 GO:0003735|GO:0005840|GO:0006412
Dere01g0875 219 Gene3D - 1 36 - -
Dere01g0875 219 SUPERFAMILY Translation proteins 4 200 IPR009000 -
Dere01g0875 219 FunFam Ribosomal protein L3 95 219 - -
Dere01g0875 219 ProSitePatterns Ribosomal protein L3 signature. 42 65 IPR019926 -
Dere01g0875 219 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 2 214 IPR045077 GO:0003735|GO:0005840|GO:0006412
Dere01g0875 219 Gene3D Translation factors 81 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0875 Dere-ChrDere01 17754428 17755226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0875 1 217 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 85.714 2.05e-145 409