Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0874 ATGTCGCACAGGAAGTTCGAACACCCCAGGCATGGTTCCCTGGGATTTCTCCCCAGGAAGCGGGCTGCTCGTCACAGGGGAAAAGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCACCCAAGCTTACTGCCTTCTTGGGTTACAAGGCCGGCATGACTCACATTGTCAGAGAGGTCGAGAAACCTGGATCAAAACTTCACAAGAAGGAAACTTGTGAACCTGTTACAATTATTGAGACCCCTCCAATGGTTATTGTTGGAGTTGTGGGTTATGTGAAAACTCCCCGTGGTCTTCGAAAATTGAATACTGTGTGGGCTCAGCATTTAAGTGAGGATGTGAAGCGCAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCATTCTCAAAGTACTCCAAGCAGTTTGAATCTGAAGAAGGGAAGACAAAACATTCAAGCTCAGCTTGA 453 0.4768 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRKLNTVWAQHLSEDVKRRFYKNWCKSKKKAFSKYSKQFESEEGKTKHSSSA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0874 150 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 145 IPR045077 GO:0003735|GO:0005840|GO:0006412
Dere01g0874 150 Gene3D Translation factors 44 82 - -
Dere01g0874 150 MobiDBLite consensus disorder prediction 1 36 - -
Dere01g0874 150 Gene3D Ribosomal protein L3, domain 3 1 43 IPR044892 -
Dere01g0874 150 FunFam 60S ribosomal protein L3 44 129 - -
Dere01g0874 150 Pfam Ribosomal protein L3 1 144 IPR000597 GO:0003735|GO:0005840|GO:0006412
Dere01g0874 150 Gene3D - 83 146 - -
Dere01g0874 150 SUPERFAMILY Translation proteins 4 137 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0874 Dere-ChrDere01 17752883 17754226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0874 1 143 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 87.413 3.12e-82 245