LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere01g0873	ATGAAGGGCTTACTTGGTTACAGAGTGATTGCGGAGAAAAATAAGCCATATATAGCTATGATCTTCATCCAGTTTGTGTATGCAGGCATGGCTTTGCTCTCCAAGGCTGCAATTTCTATGGGAATGAACCCTTATGTGTTTGTTGTCTACAGGCAAGCTTTTGCATCAATTGCCTTGTCTCCATTTGCCTTCTTTGACAGTAAGCAGGCTGCTTCCTTGTCTTACGCCATGATCTGCAAAATCTTTCTTGTTTCCCTATTTGGGTTAACTTTGAGTTCAAGCCTTTACTATGTTGCAATCAACTATACATCTGCAACTTTTGCTGCAGCGTCCTCAAACACTGTCCCTGCCATTACTTTTATCATGGCTGTTATAATGAGGGTGGAAAGCGTTTCCATAAAACACATGTCTGGGAGGGCCAAGATTGTTGGTTCAATTCTGAGCCTTTCTGGAGCAATCATATTTGCTTTAGTGAAAGGGCCTCCTCTAGATTTCATGAAGTGGTATCCTGCAAATCAGGTGCATCACTCTTCAATGTCACCAACAAAGTTTCACTCAAAAGGGGATTTAATCAAAGGCCCTATTATGATGCTTTCTGCTAACACTGCTTGGTCCTTATGGCTAATATTGCAAGGTTTCATTGTAAAGCAATACGATGCGAAATTTCGCCTCACCACTCTGCAATGCTTCTTCAGCTGCATACAGTCAGCAGTTTTGGCTGTTGCAGTGGAGAGAAATCCTTCATCATGGAAGCTTGGATGGGACATTCATCTTCTTTCTGTGGCCTACTGTGGTGTAATTGTGACGGGGATTTGTTATTGGCTTCAAGTATGCACTATAGAGGAGAAAGGACCAGTTTTCACAGCAATGTTTACCCCTCTCGCTCTTATCATCACAGCAATATTCTCAGCACTTTTGTGGAAGGAGACACTTCACTGGGGAAGTGTGGGTGGTACTATTTTGTTGGTGGTTGGACTCTACAGCGTATTGTGGGGGAAGAACAGAGAGAGTGTAAAGCAGGAAAACCATGAAGAGAGACAAGAGGCCAAATTAGAGGAAACCAGATTGGACTGCATTATACAGCACTAG	1089	0.4288	MKGLLGYRVIAEKNKPYIAMIFIQFVYAGMALLSKAAISMGMNPYVFVVYRQAFASIALSPFAFFDSKQAASLSYAMICKIFLVSLFGLTLSSSLYYVAINYTSATFAAASSNTVPAITFIMAVIMRVESVSIKHMSGRAKIVGSILSLSGAIIFALVKGPPLDFMKWYPANQVHHSSMSPTKFHSKGDLIKGPIMMLSANTAWSLWLILQGFIVKQYDAKFRLTTLQCFFSCIQSAVLAVAVERNPSSWKLGWDIHLLSVAYCGVIVTGICYWLQVCTIEEKGPVFTAMFTPLALIITAIFSALLWKETLHWGSVGGTILLVVGLYSVLWGKNRESVKQENHEERQEAKLEETRLDCIIQH	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere01g0873	362	PANTHER	WAT1-RELATED PROTEIN	15	342	IPR030184	GO:0016020\|GO:0022857
	Dere01g0873	362	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	250	335	-	-
	Dere01g0873	362	Pfam	EamA-like transporter family	192	330	IPR000620	GO:0016020
	Dere01g0873	362	Pfam	EamA-like transporter family	15	149	IPR000620	GO:0016020
	Dere01g0873	362	Coils	Coil	335	355	-	-
	Dere01g0873	362	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	50	149	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere01g0873	Dere-ChrDere01	17694763	17698362	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere01g0873	14	337	Nodulin-like Gene Family	AT5G07050	37.273	3.89e-82	254