Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0865 ATGGGAAATATTGTTCCTTCTAGTGTTACCCCACCTCTGTTATTTTCTCTATTCTTCTTCTGGCTGACCATGACAAAGATTGAAGAAGTCACCTCTCTCTCACCTGATGGACAAGCCCTTCTTTCCCTTCTGTTTTCAGTTGACCCTTCTGCAAAATCCTCCTCTTCTGTTCTCTCCTCATGGAACCCATCAAGCCCAACCCCTTGTTCATGGCATGGCATCACTTGCTCGCCACAAGGCAGAGTCATTTCCCTCTCTATTCCAGACACTTTCCTTAACCTCTCCTCTCTGCCTTCCCAGCTTTCTTCGTTATCATCTCTACAACTTCTCAATCTGTCTTCCACTAATATATCTGGATCCATCCCACCTTCTTTTGGCCAACTCTCCCACCTTCGCCTCCTTGACATCTCTTCAAATTCTCTCACTGGTTCCATTCCTGAAGAACTCGGAAAACTCTCTTCGCTTCAATTCCTTTTCTTGAACTCCAATAGATTGACTGGAAGGATTCCTCAGGAGCTTGCTAATCTTACTTCACTTGAAGTTTTCTGCCTCCAAGATAATCTCCTTAATGGGTCGATACCATCTCAGTTAGGCTCTTTGACATCTCTACAACAGTTTCGAATTGGGGGTAATCCATATCTAAGTGGTGAAATTCCATCACAATTAGGACTACTCACCAATCTCACCACATTTGGGGCTGCAGCCACTGGACTTTCAGGTGTTATACCCTCTACATTTGGGAACTTGATCAATCTCCAAACCCTTGCTCTTTATGATACAGAAATGTCTGGTTCTATACCGCCAGAGCTTGGCCTGTGTTCTGAGCTAAGGAATCTGTATTTGCACATGAACAAGTTGATTGGTTCTATCCCACATCAACTTGGTAAGTTGCAAAAGCTTACTAGCTTGCTTCTTTGGGGCAATGCCTTGTCTGGGCCAATCCCTGCTGAGATTTCCAATTGTTCATCACTTGTTGTGTTTGATGCCTCTGCCAATGAACTTTCGGGTGAAATACCACACGATTTTGGGAAACTGGTGGTTCTGGAACAGTTTCATCTATCAGACAATTCACTCACAGGGAAAATACCATGGCAACTGAGCAACTGCACTAATCTTGCTACCATTCAGCTTGACAAGAATCAGTTATCAGGTACTATTCCATGGCAGGTTGGGAAATTAAAATATTTGCAAAGTTTTTTCTTGTGGGGGAATTCAGTGTCTGGAACCATACCTTCCTCGTTTGGCAACTGCACTGAGCTTTATGCACTTGACCTTTCAAGGAACAAGCTAACAGGTTCCATCCCAGATGAAATTTTCGGCTTGAAGAAACTCAGTAAGCTTTTGCTTCTGGGAAATTCCTTATCTGGAGAATTACCACCAAGTGTTGCATATTGTGACTCTCTAGTGAGGTTGAGGCTTGGAGAAAATCAGCTTTCAGGACAGATTCCTAGAGAGTTAGGCCAACTGCAAAATCTGGTGTTCCTCGACTTGTACCTGAACCATTTCTCAGGAAGCTTACCGGTGGAGATTGCGAACATCACAGTTCTTGAGCTTCTAGATGTTCATAATAATTATATTACTGGGGATATCCCGTCTCAGCTTGGGGAGCTTGTAAATTTAGAGCAGCTAGATCTCAGTAGAAACAGTTTAACAGGTGAAATTCCTTGGAGCTTTGGAAATTTTAGTTATTTGAACAAGCTCACTCTCAACAATAATTTACTCACAGGGTCAATCCCTAAATCCATTAGAAACTTGCGAAAGCTAACTCTATTGGATTTGAGTAACAATAACTTTTCGGGTGACATCCCATCTGAGATTGGTTATATTACTAGCTTAACCATCAGTTTAGACTTGAGCTCAAATGCTTTTACAGGAGAAATCCCTGAGTCAATGGCTACTTTGACACAGTTACAATCACTTGATCTTTCACATAATATGCTTTATGGAAGAATAAAGGTTCTTGGTTCTCTCACCAGTCTCACTTCCCTTAATATCTCCTACAACAACTTCTCAGGTCCTATCCCGGTAACTCCTTTCTTCAGAACTCTATCTTCAAATTCATATCTTCAGAATCCCCGTCTTTGTGAATCCCTTGACGGGACCACATGTTCTAGTCTACTTCAAAAAAATGGTATAAAATCTGCAAAAACCATAGCATTGATATCGGTAATTCTTGCCTCAATTACCATAATTGTCATTGCATCATGGATTTTGGTGACACGAAATCACAAGTATATGGTTGAAAAATCTTTGGGGACATCAAATTCTTCATCAGGAGCTGAGGATTTATCCTATCCTTGGACTTTCATCCCATTTCAAAAACTAAACTTCACAATAGATAATATCTTGGATTGCTTGAAGGATGAGAATGTGATTGGAAAGGGTTGCTCTGGTATTGTATACAAGGCTGAATTGTCTAATGGGGAGTTGATAGCAGTGAAGAAGCTTTGGAAAGCAAACAGAGAGGAAGAAACTGTGGATTCTTTTGCTGCAGAAATTCAGATACTTGGGCACATCCGACACAGGAATATTGTGAGGCTCCTGGGTTATTGTTCTAACAGAAGTGTTAAGCTTCTTCTTTATAACTACATTTCAAATGGTAATTTAAGACAGCTGTTGCAAGGGAACAGGTACCTAGACTGGGAAACTAGGTATAAGATTGCTGTTGGCTCAGCTCAGGGTCTAGCATACCTTCATCATGACTGTGTGCCAGCAATTCTTCACAGAGATGTTAAGTGCAATAACATACTTCTAGATTCCAAGTTTGAGGCATATCTGGCAGACTTTGGCTTGGCCAAGCTGATGAATTCACCAAATTATCACCATGCAATGTCCAGAGTTGCTGGATCCTATGGTTATATTGCCCCAGAGTATGGCTACACCATGAACATAACAAAGAAGAGTGACGTCTACAGTTATGGAGTGGTTTTGCTGGAGATACTAAGTGGGCGAAGTGCTGTTGAATCCCATGTTGGGGATGGGGTACACATAGTTGAATGGGTCAAGAGGAAGATGGGAAGCTTTGAACCAGCTGTGTCAATTCTGGACACAAAGCTCCAAGGCCTACCAGATCAAATGGTGCAAGAGATGCTTCAAGCACTTGGAATTGCTATGTTCTGTGTGAACTCCTCGCCGGTGGAGCGACCTACAATGAAGGAAGTGGTGGCACTACTAATGGAGGTGAAGAGCCCACCTGAGGAGGTGGGTAAGACCTCTCAGCCTCTAATAAAGCAGTCCTCAAATCAAAGCTAA 3252 0.4216 MGNIVPSSVTPPLLFSLFFFWLTMTKIEEVTSLSPDGQALLSLLFSVDPSAKSSSSVLSSWNPSSPTPCSWHGITCSPQGRVISLSIPDTFLNLSSLPSQLSSLSSLQLLNLSSTNISGSIPPSFGQLSHLRLLDISSNSLTGSIPEELGKLSSLQFLFLNSNRLTGRIPQELANLTSLEVFCLQDNLLNGSIPSQLGSLTSLQQFRIGGNPYLSGEIPSQLGLLTNLTTFGAAATGLSGVIPSTFGNLINLQTLALYDTEMSGSIPPELGLCSELRNLYLHMNKLIGSIPHQLGKLQKLTSLLLWGNALSGPIPAEISNCSSLVVFDASANELSGEIPHDFGKLVVLEQFHLSDNSLTGKIPWQLSNCTNLATIQLDKNQLSGTIPWQVGKLKYLQSFFLWGNSVSGTIPSSFGNCTELYALDLSRNKLTGSIPDEIFGLKKLSKLLLLGNSLSGELPPSVAYCDSLVRLRLGENQLSGQIPRELGQLQNLVFLDLYLNHFSGSLPVEIANITVLELLDVHNNYITGDIPSQLGELVNLEQLDLSRNSLTGEIPWSFGNFSYLNKLTLNNNLLTGSIPKSIRNLRKLTLLDLSNNNFSGDIPSEIGYITSLTISLDLSSNAFTGEIPESMATLTQLQSLDLSHNMLYGRIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSSNSYLQNPRLCESLDGTTCSSLLQKNGIKSAKTIALISVILASITIIVIASWILVTRNHKYMVEKSLGTSNSSSGAEDLSYPWTFIPFQKLNFTIDNILDCLKDENVIGKGCSGIVYKAELSNGELIAVKKLWKANREEETVDSFAAEIQILGHIRHRNIVRLLGYCSNRSVKLLLYNYISNGNLRQLLQGNRYLDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEAYLADFGLAKLMNSPNYHHAMSRVAGSYGYIAPEYGYTMNITKKSDVYSYGVVLLEILSGRSAVESHVGDGVHIVEWVKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQALGIAMFCVNSSPVERPTMKEVVALLMEVKSPPEEVGKTSQPLIKQSSNQS 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0865 1083 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 565 1053 - -
Dere01g0865 1083 Gene3D Transferase(Phosphotransferase) domain 1 864 1076 - -
Dere01g0865 1083 Pfam Leucine rich repeat 396 454 IPR001611 GO:0005515
Dere01g0865 1083 Pfam Leucine rich repeat 106 165 IPR001611 GO:0005515
Dere01g0865 1083 Pfam Leucine Rich Repeat 539 561 IPR001611 GO:0005515
Dere01g0865 1083 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Dere01g0865 1083 ProSitePatterns Serine/Threonine protein kinases active-site signature. 906 918 IPR008271 GO:0004672|GO:0006468
Dere01g0865 1083 Gene3D Ribonuclease Inhibitor 390 468 IPR032675 -
Dere01g0865 1083 FunFam Putative LRR receptor-like serine/threonine-protein kinase 436 705 - -
Dere01g0865 1083 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Dere01g0865 1083 ProSiteProfiles Leucine-rich repeat profile. 636 658 IPR001611 GO:0005515
Dere01g0865 1083 PRINTS Leucine-rich repeat signature 634 647 - -
Dere01g0865 1083 PRINTS Leucine-rich repeat signature 540 553 - -
Dere01g0865 1083 MobiDBLite consensus disorder prediction 1064 1083 - -
Dere01g0865 1083 SUPERFAMILY L domain-like 57 407 - -
Dere01g0865 1083 Gene3D Ribonuclease Inhibitor 469 572 IPR032675 -
Dere01g0865 1083 SMART serkin_6 786 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0865 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 212 435 - -
Dere01g0865 1083 Gene3D Ribonuclease Inhibitor 573 705 IPR032675 -
Dere01g0865 1083 Gene3D Ribonuclease Inhibitor 36 193 IPR032675 -
Dere01g0865 1083 Gene3D Ribonuclease Inhibitor 289 389 IPR032675 -
Dere01g0865 1083 Gene3D Ribonuclease Inhibitor 194 288 IPR032675 -
Dere01g0865 1083 Gene3D Phosphorylase Kinase; domain 1 761 863 - -
Dere01g0865 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 864 1076 - -
Dere01g0865 1083 SUPERFAMILY Protein kinase-like (PK-like) 768 1059 IPR011009 -
Dere01g0865 1083 SUPERFAMILY RNI-like 305 689 - -
Dere01g0865 1083 SMART LRR_typ_2 152 175 IPR003591 -
Dere01g0865 1083 SMART LRR_typ_2 417 441 IPR003591 -
Dere01g0865 1083 SMART LRR_typ_2 537 560 IPR003591 -
Dere01g0865 1083 SMART LRR_typ_2 634 661 IPR003591 -
Dere01g0865 1083 SMART LRR_typ_2 104 127 IPR003591 -
Dere01g0865 1083 SMART LRR_typ_2 297 321 IPR003591 -
Dere01g0865 1083 SMART LRR_typ_2 585 609 IPR003591 -
Dere01g0865 1083 SMART LRR_typ_2 176 200 IPR003591 -
Dere01g0865 1083 SMART LRR_typ_2 128 151 IPR003591 -
Dere01g0865 1083 Pfam Protein kinase domain 788 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0865 1083 ProSiteProfiles Protein kinase domain profile. 786 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0865 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 767 863 - -
Dere01g0865 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 33 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0865 Dere-ChrDere01 17489267 17492881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0865 54 1062 Receptor kinase-like Gene Family AT5G56040 46.086 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere01g0865 Pkinase 3.9e-45 CL0016