Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0855 ATGACTCTCCTATACAGATGCATTATGTCTAAGATGTCCACTTCTCAAAAGGATACAAATATGTTCTTTATGTCGATTAATGAAGGAGAGAAAAAGCCATTTGACTTTTTACGTTTTGTATATGATGGGTGCATTGCTGGAGGTGTTGCTGGCATTGTTGTAGAAACAGCTTTATATCCGATTGACACTATAAAAACTCGACTTCAGGCTGCCCGTGGTGGAGGTAAAATCATTATGAAGGGTCTATATTCTGGATTGGCTGGAAATCTGGCTGGTGTCTTACCAGCTTCTGCAATTTTTGTTGGTGTATATGAACCCACAAAGCAGAAACTGCTAGCATCATTACCTGAATATCTCAGCGCTTTGGCTCATCTTGCTGCAGGTGCCATTGGAGGTGCTGCTTCTTCTCTTGTCCGTGTTCCAACTGAGGTTGTTAAGCAAAGAATGCAAACTGGACAATTTAGTTCAGCCCCTGCTGCTCTCCGTCTCATTGTTGCCAATGAGGGTTTTAAAGGTCTCTATGCGGGATATGGATCCTTCTTATTGCGAGACTTGCCATTTGATGCCATACAATTTTGCATTTATGAGCAGCTCCGGATAGGGTATAAGCTAGCGGCAAAAAGAGATCTGAATGATCCAGAGAATGCTATGCTTGGTGCTTTTGCTGGTGCTGTAACTGGAGCAGTTACAACTCCTCTCGATGTAGTAAAGACCAGATTGATGGTTCAGGGATCACAATACCAGTACAAAGGCATAAGTGATTGTGTGAGGACAATTATCAAAGAAGAAGGAACTCAAGCTCTTTTCAAGGGTATGGGGCCTAGAGTATTGTGGATAGGCATTGGAGGTTCAATTTTCTTTGGTGTTCTTGAGAAGACTAAGCAAATTCTTGCTCAAAGGCACCAACAAAAGGAGGCTGAGAAGCCAATTTCTTGCCAAAAATGA 945 0.4222 MTLLYRCIMSKMSTSQKDTNMFFMSINEGEKKPFDFLRFVYDGCIAGGVAGIVVETALYPIDTIKTRLQAARGGGKIIMKGLYSGLAGNLAGVLPASAIFVGVYEPTKQKLLASLPEYLSALAHLAAGAIGGAASSLVRVPTEVVKQRMQTGQFSSAPAALRLIVANEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAKRDLNDPENAMLGAFAGAVTGAVTTPLDVVKTRLMVQGSQYQYKGISDCVRTIIKEEGTQALFKGMGPRVLWIGIGGSIFFGVLEKTKQILAQRHQQKEAEKPISCQK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0855 314 Gene3D Mitochondrial carrier domain 40 312 IPR023395 -
Dere01g0855 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 37 110 IPR018108 -
Dere01g0855 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 201 IPR018108 -
Dere01g0855 314 Pfam Mitochondrial carrier protein 214 299 IPR018108 -
Dere01g0855 314 Pfam Mitochondrial carrier protein 42 111 IPR018108 -
Dere01g0855 314 Pfam Mitochondrial carrier protein 119 199 IPR018108 -
Dere01g0855 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 296 IPR018108 -
Dere01g0855 314 SUPERFAMILY Mitochondrial carrier 44 291 IPR023395 -
Dere01g0855 314 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 42 309 - -
Dere01g0855 314 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Dere01g0855 314 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Dere01g0855 314 PRINTS Mitochondrial carrier protein signature 174 192 IPR002067 GO:0055085
Dere01g0855 314 PRINTS Mitochondrial carrier protein signature 219 241 IPR002067 GO:0055085
Dere01g0855 314 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 23 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0855 Dere-ChrDere01 17343103 17350462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0855 94 299 Chloroplast and Mitochondria Gene Families AT1G07030 28.054 3.93e-17 79.0