Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0844 ATGCAGAAGACTCGGTTCCCCCAGTCTCTCTCTCGTCTCCTCCTCATGTATTTCTCTTGTTCTGTTATCAGCCTAATTGCCAAAAGAATCCCCACAGTGAATCCGATTCTGCCTAACATCCAGTTGGTCACCACTACAGAAGGTCCAAATCCCCTGGGGTTTCTCAAGGTCGTGCATATAGGCGCACTGGCTCCGCCGGTAAGCCCATGTCTGAGCCAAGTGAGTTATTTCACAAGTAAAAGTGAAGAACACAAAATGGCTTGTGCTACCAGTGGAGTTGCTATCACACTCGTCTCCTTTCTTCTGCTGGGTTCTCTGGTCCATGAATCTGAGGCAGCAGCGAGGCATCCTATAGTGAATGGTCTCTCATGGAGTTTCTACGAATCAAGCTGCCCTGATCTTCAATCCATCATCAGAAAACACCTCAAGAAGGTCTTCAAGAAAGACGTTGGCCAAGCTGCTGGCTTGCTTCGCCTTCATTTCCATGATTGCTTCGTTCAGGGTTGTGACGGGTCGGTATTACTGGACGGATCTGCAAGTGGGCCAAGCGAGAAGGAGGCCCCACCGAACTTGAGCTTGAGGGCTGAGGCTTTTAAGATCATCGACGACCTGAGGGCGTGTGTCCACAAGCGCTGCGGAAGAGTCGTCTCCTGTGCTGACGTCACCGCCCTTGCCGCGCGTGATGCTGTTTTTCTGTCTGGAGGACCAGACTACGAAGTTCCCTTAGGAAGGCGAGACGGGCTTACCTTCGCCACAAGAAACGCGACCCTGGCTAACCTCCCAGCGCCTTCCAACAACGCTAGCGTCATCCTGGCGTCACTTGCCACCAAAAACTTCAGCCCAACCGACGTTGTAGCGCTCTCAGGCGGCCACACCATAGGCGTCGGCCACTGCACCTCCTTCACCAACAGGCTCTACCCCAACCAAGACCCCGTCATGGACAAGATCTTCGCCGACAACCTCAAGATCACGTGCCCCGCCGTGACCACAGAAAACACAACCGTGCTCGACCTCCGAACCCCCAACCAGTTCGACAACAAGTACTACGTGGACCTCCTGAACCGCCAGGGACTCTTCACATCGGACCAAGACTTGTTCTCCGACGAGAGGACTAGGGAGATTGTGAGAGACTTTGCTGTGAACCAGAGTCTTTTCTTCGACAAGTTTGCGGAGGCCATGGTGAAGATGGGTCAGCTGAGCGTGTTGAGGGGGCCCCAAGGGGAGATTCGAGCGAATTGCTCTGTGAGGAACGTGGATAACGAGTATTTCTTGATGAGCCCTGTGGAGGAAGATGTAGTGGAAGAGAGGTCGGAACTGTGA 1320 0.5348 MQKTRFPQSLSRLLLMYFSCSVISLIAKRIPTVNPILPNIQLVTTTEGPNPLGFLKVVHIGALAPPVSPCLSQVSYFTSKSEEHKMACATSGVAITLVSFLLLGSLVHESEAAARHPIVNGLSWSFYESSCPDLQSIIRKHLKKVFKKDVGQAAGLLRLHFHDCFVQGCDGSVLLDGSASGPSEKEAPPNLSLRAEAFKIIDDLRACVHKRCGRVVSCADVTALAARDAVFLSGGPDYEVPLGRRDGLTFATRNATLANLPAPSNNASVILASLATKNFSPTDVVALSGGHTIGVGHCTSFTNRLYPNQDPVMDKIFADNLKITCPAVTTENTTVLDLRTPNQFDNKYYVDLLNRQGLFTSDQDLFSDERTREIVRDFAVNQSLFFDKFAEAMVKMGQLSVLRGPQGEIRANCSVRNVDNEYFLMSPVEEDVVEERSEL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0844 439 CDD secretory_peroxidase 121 415 IPR033905 GO:0004601|GO:0042744
Dere01g0844 439 ProSiteProfiles Plant heme peroxidase family profile. 121 417 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 Pfam Peroxidase 139 380 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 SUPERFAMILY Heme-dependent peroxidases 116 417 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 FunFam Peroxidase 125 273 - -
Dere01g0844 439 PRINTS Plant peroxidase signature 131 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Plant peroxidase signature 155 175 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Plant peroxidase signature 335 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Plant peroxidase signature 215 225 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Plant peroxidase signature 391 404 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Plant peroxidase signature 196 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Plant peroxidase signature 351 368 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Plant peroxidase signature 282 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 Gene3D - 126 414 - -
Dere01g0844 439 PANTHER PEROXIDASE 72-RELATED 120 414 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 FunFam Peroxidase 261 396 - -
Dere01g0844 439 ProSitePatterns Peroxidases active site signature. 153 164 IPR019794 GO:0004601
Dere01g0844 439 ProSitePatterns Peroxidases proximal heme-ligand signature. 283 293 IPR019793 -
Dere01g0844 439 PRINTS Haem peroxidase superfamily signature 337 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Haem peroxidase superfamily signature 153 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Haem peroxidase superfamily signature 234 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Haem peroxidase superfamily signature 216 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 PRINTS Haem peroxidase superfamily signature 283 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0844 439 Gene3D Peroxidase, domain 2 262 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0844 Dere-ChrDere01 17077579 17084676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0844 90 434 Peroxidase AT1G71695 60.000 8.60e-158 448