Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0840 ATGACAAATTCTCAATTAGTCTATAAGCTTTCAATTTTGCATTCAAAGGTTACTTTTATAAGTATTTTTGGGCATTCCAAAGAGAAAGACAGGTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGCAACTCAGCAGGAGCAAGTACTTCCCTACTTCTCCATCATTTAGATTATGCACGTACAAGATTGGGCACTGATGCATTAGAGTGCCCTGTTAATGGTCAGCACCAATTTAAAGGGCTAGTTGATATATATCGTAAAACCTTATCAAGCGATGGAATTGTTGGCTTGTACAGGGGATTTGGGGTCTCAATAATGGGAATCACCATGTATCAAGGCATGTACTTTAAGATTTATGACAACATGAAACCTGTTGTTTTAATTGGGCCTCATGAGGCCTTGACAGGCTCGGATTGCAACACACCGAGCTATCGGGCCAGGGCTAGAAAACTGACCCCAAAAGCTTCCCCGGGTCAACCCTCAAGCTTGTGTTTAGCCCGGGTTGACCTGAGGGTTGTGCAACCCTAA 531 0.4294 MTNSQLVYKLSILHSKVTFISIFGHSKEKDRYIKWFAGNVASGNSAGASTSLLLHHLDYARTRLGTDALECPVNGQHQFKGLVDIYRKTLSSDGIVGLYRGFGVSIMGITMYQGMYFKIYDNMKPVVLIGPHEALTGSDCNTPSYRARARKLTPKASPGQPSSLCLARVDLRVVQP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0840 176 SUPERFAMILY Mitochondrial carrier 26 128 IPR023395 -
Dere01g0840 176 Gene3D Mitochondrial carrier domain 5 164 IPR023395 -
Dere01g0840 176 Pfam Mitochondrial carrier protein 35 126 IPR018108 -
Dere01g0840 176 PRINTS Mitochondrial carrier protein signature 49 67 IPR002067 GO:0055085
Dere01g0840 176 PRINTS Mitochondrial carrier protein signature 99 117 IPR002067 GO:0055085
Dere01g0840 176 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 17 132 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere01g0840 176 ProSiteProfiles Solute carrier (Solcar) repeat profile. 34 126 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0840 Dere-ChrDere01 16957547 16958157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0840 19 134 Antiporters AT5G17400 72.414 3.07e-59 185