Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0775 ATGGCTGCTGTTCCATTATCCGCTCTATATGCGGACACTATTGAGCCTTCACAAAAACAGATGGCTCACATACCAGAGGATTCAGAAGGAGCTCAAGTCTTGAAAAAAGCCGAAAAGAGCTATCTAGCAGCTCCTATGCATGCAGAAATAATAGAGAGGCGATGGGGTGGTAGCAAGAATGTGACAGTTGATGATATAGAGGTTAGGATGAATAATTTGCTGATAGAATATGTAGTAAGCGGTGACAAGAAAGAAGCTTTTAGATGCATCAAGGATTTGAAAGTACCCTTCTTTCATCATGAAATAGTGAAACGAGCTCTTATAATGGCAATGGAGAGGCATCAAGTAGAAGGGAAACTGATATATCTCTTAAAAGATACAGCAGAAGAAGGTTTCATTAACTCAAGCCAAATGTCAAAGGGGTTTGGTTGGTTAATCGACACAGTTGATGACTTGTTGCTTGACATACCAAATGCACGAGGAAGTTTTGCAGCAGTTAATGTCCAAGGCTGCATCTGA 519 0.4066 MAAVPLSALYADTIEPSQKQMAHIPEDSEGAQVLKKAEKSYLAAPMHAEIIERRWGGSKNVTVDDIEVRMNNLLIEYVVSGDKKEAFRCIKDLKVPFFHHEIVKRALIMAMERHQVEGKLIYLLKDTAEEGFINSSQMSKGFGWLIDTVDDLLLDIPNARGSFAAVNVQGCI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0775 172 ProSiteProfiles MI domain profile. 65 172 IPR003891 -
Dere01g0775 172 Gene3D - 51 170 - -
Dere01g0775 172 Pfam MA3 domain 70 164 IPR003891 -
Dere01g0775 172 PANTHER PROGRAMMED CELL DEATH 4 18 167 IPR039778 GO:0045892
Dere01g0775 172 SMART ma3_7 66 167 IPR003891 -
Dere01g0775 172 SUPERFAMILY ARM repeat 62 164 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0775 Dere-ChrDere01 15550057 15550708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0775 65 166 Eukaryotic Initiation Factors Gene Family AT4G30680 27.885 5.37e-08 49.3