Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0767 ATGACTGTGGTGTCGGACTCTTCTCCGGAGTGTTTCAGCAAGGTGATGGCGTCGATGCCGGGGTTTCGGTTCCATCCTACGGATGAGGAACTGGTCATGTACTATCTGAAAAGGAAGATGTGTAGGAGGAAGCTGAAGCTTGATGTAATTCGCGTGATTGATGTCTACAAGTGGGATCCTGAGGAATTGCCTGGGCAGTCAGTGCTGAAAACTGGAGATAGGCAATGGTTCTTTTTCAGCCCTAGAGATAGAAAGTATCCTAATAGTGCAAGGACGAATCGTGCAACAAGGCATGGGTACTGGAAAGTAACGGGAAGGGATCGTGATGTGACATACAATTCTCGGACAGCTGGGGTGAAAAAGACACTAGTTTTCTATAGGGGTCGAGCACCAAATGGTGAGCGAACTGATTGGGTTATGCATGAGTACACCTTGGAAGAAGAAGAACTTGCAAGATGCCAGGGTTTTAAGGACTATTATGCACTTTATAAGGTGTTCAAGAAAAGCGGACCTGGTCCTAAAAATGGTGAACAGTATGGTGCACTATTTAAAGAAGAAGATTGGGTAGATGATGACTTCGTAGATTTTAATATTAATTCAGTTGACAGGGAGGCTCCAGTTTCACAAATTGATGAGGGTACTTCGGTTGATACTGTCACTTTTAATGATCAAGTGCAGCCTTTGCTTGATGATGAAATTGATGAGATCTTGAAAAGAATGATGGATGACCATGTTCCTGACCAGCCGACACTTTATCCTGCCTTATCTCAGGTTGCTGCTGAAGACACACAAACTGCTGCGGTGGATCAATTCTCTAGGGAGCTGATGTTTGCTGAGCCAAATGAAATGTCTCATCCAAATCTTCAGCAATATGATGTGCAGGACAGCTATGACCTCACTCAGTCAGCTACCTCTCACTTACATGTTTATGAAGCACCTGAGGTCACTTCTTCTGCTCCCAACATTCAAGTAGAGGAGCCTCTCTTTCACGAGGATGACTACTTGGAAATTGATGATCTCATGGGTCCTGAAGGTCCTGAACCAGCAATGTCCAACTCAGAAAATCCTTTGGAGAACTTGCAGTTTGAAGATGGACTAAGTGAACTTGACCTGTACCATGACGCTGAGATGTTTCTACGTGACCTGGGGCATATTGATCAGGGAACTGTTTCATATCCATATATAAATACTTTCAACAGTAATGTTGTAAGCCAGCATTATAAGTCGCTGCCCATTGGAGAGGAAGCAGATCAAACTGGTGGTGAACTCTGGATGCATGGTCAAAGGCAGATCTTGAATCCGGCAGAACACATTAATGGTTCTTTCTCTCTACCAACCTCAGGTGGGGTTTATGAATCTGCCAGCTTGCCTACCGATGGCAATCATAATCAAAGTAGCAGTGCGAGACATGTTTCTCCAAATAGAATGTCTTCTGCTCTATGGGCATTTGTTGAGTCAATACCTACCACTCCTGCATCAGCTGCTGAAAATGCAAATCGAGCCTTTGAGCGGATGTCTAGCTTTAGTAGGATGAGAATTAATCTGAAACAGGCAAGCGCTGCTGCTGCTGCTGCAGGTAATGAATCTACCACTATTAAGAGACCAGGCAGAAGAAAGGGAGTTTTGTTCTTTTTCTTCCCGGTTCTTGTTGCTTTATGTGCTTTTTTGTGGGTTTCTATGGGAACGTTGAGACTATTTGGAAGATGCAACCCTTGA 1716 0.4417 MTVVSDSSPECFSKVMASMPGFRFHPTDEELVMYYLKRKMCRRKLKLDVIRVIDVYKWDPEELPGQSVLKTGDRQWFFFSPRDRKYPNSARTNRATRHGYWKVTGRDRDVTYNSRTAGVKKTLVFYRGRAPNGERTDWVMHEYTLEEEELARCQGFKDYYALYKVFKKSGPGPKNGEQYGALFKEEDWVDDDFVDFNINSVDREAPVSQIDEGTSVDTVTFNDQVQPLLDDEIDEILKRMMDDHVPDQPTLYPALSQVAAEDTQTAAVDQFSRELMFAEPNEMSHPNLQQYDVQDSYDLTQSATSHLHVYEAPEVTSSAPNIQVEEPLFHEDDYLEIDDLMGPEGPEPAMSNSENPLENLQFEDGLSELDLYHDAEMFLRDLGHIDQGTVSYPYINTFNSNVVSQHYKSLPIGEEADQTGGELWMHGQRQILNPAEHINGSFSLPTSGGVYESASLPTDGNHNQSSSARHVSPNRMSSALWAFVESIPTTPASAAENANRAFERMSSFSRMRINLKQASAAAAAAGNESTTIKRPGRRKGVLFFFFPVLVALCAFLWVSMGTLRLFGRCNP 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0767 571 MobiDBLite consensus disorder prediction 449 470 - -
Dere01g0767 571 SUPERFAMILY NAC domain 16 168 IPR036093 GO:0003677|GO:0006355
Dere01g0767 571 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Dere01g0767 571 FunFam Nac domain-containing protein 86 27 171 - -
Dere01g0767 571 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 272 - -
Dere01g0767 571 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Dere01g0767 571 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0767 Dere-ChrDere01 15452376 15455765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0767 4 568 NAC Transcription Factor Family AT1G34190 44.816 3.10e-147 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere01g0767 NAM 3.9e-36 No_clan