Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0721 ATGTTGGATCTCAACGTCGATGTGGAAGGTTTTCAGACCCAAATGGAAGAAGATTCCGGGACCTCCAACTCCTCCGTGCTGAATTTCGAAGAATCTCGAGACGAAGATTCTTCCGCCTTCGTTTTCGACATATTGAAGAGAGAAACAGACGGTGGGGTCAAAGAGGAAGAAGAGAAGGCAACTCCAGAAATCAGGACGAAGCCGCTTTTCCCTGTGAGTGGCGGAGACAAAGGAGGAGGCAGAGAGAGTGATTTCAGATTGGGACCGTGCTCGAGAAGTAGTCAGTGGCTGAGCCTATCCTTCGCTGAGGGTGGTGCTGGTGGGCATGATGAGTTGAGACTGTTACAACAAAAGCAACCACAAAGCAGGAAAAGTAGAAGAGGACCCAGGTCTCGCAGCTCCCAGTACAGAGGTGTTACCTTCTACCGTAGGACTGGTCGATGGGAATCCCATATATGGGATTGTGGGAAGCAGGTCTATTTAGGTGGATTTGACACTGCACATGCTGCAGCAAGAGCATACGATAGGGCTGCAATTAAGTTCAGAGGAGTTGATGCTGATATAAATTTTAGTTTAAGTGATTATGAGGAAGACATGAAGCAGATGAGGGATTTGAGTAAAGAGGAGTTTGTCCAAGTCCTTCGTCGCCAATGCTCTGGTATCCCAAGAGGGACCTCAAAATATCGAGGTATTTCTCTCCACAAATGGGGTCACTGGGAAGCACAAATGAGCCCTGTGCTTGGCAAGAGGATTTATGACAAGCTACCCATAAAGTGTGATGGAAGAGAACTGATAACCAGCTTTGAGCCCAGTAAGGGAGAAGGAACTACTGAGTCTAGCAGAGGAGGGAATTGTCACAATCTTGATTTGAGCCTTGGAATTTCTCCACCTTCCAGAGAATCCAAGAAGAATGACGATGGGAGAGACTTACCTTATCCTTATACAGCTTGTAGCATACCCAACAGAGGAGGACCAATGGCTGATAGCACTGGTCCTGCATTAATAAGGGGACAAGCCATTTATGATGTAGCAATGACATCTAAATATGATCAGATTTGCTCTGGCTTATATCCTGGTTATGTACGAAACTATGAGGAGAAGGCCATGGAGCAGAGAATGGAAGCTGTTCCTTTGTCCAGATTCTCCAATTTGGCTTGGCAACTTCATAGCAACGGCAGCATCGCCCCGGTGCTGGTGCCGGTGCCGGTGCTTTCCAGTGCAGCATCATCAAAATTCAATTCTTCTAGCAACCATGCTTTATCAGCCCCACTTCCAGTCAACCCTCATAACAAATCTATCTACAATTTGAGCTTCAGTTCAACCACAACATCCACCATTAATAACTCTCCAAGTTGCCAGAGTCAGAGTAGCTGA 1374 0.4665 MLDLNVDVEGFQTQMEEDSGTSNSSVLNFEESRDEDSSAFVFDILKRETDGGVKEEEEKATPEIRTKPLFPVSGGDKGGGRESDFRLGPCSRSSQWLSLSFAEGGAGGHDELRLLQQKQPQSRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFSLSDYEEDMKQMRDLSKEEFVQVLRRQCSGIPRGTSKYRGISLHKWGHWEAQMSPVLGKRIYDKLPIKCDGRELITSFEPSKGEGTTESSRGGNCHNLDLSLGISPPSRESKKNDDGRDLPYPYTACSIPNRGGPMADSTGPALIRGQAIYDVAMTSKYDQICSGLYPGYVRNYEEKAMEQRMEAVPLSRFSNLAWQLHSNGSIAPVLVPVPVLSSAASSKFNSSSNHALSAPLPVNPHNKSIYNLSFSSTTTSTINNSPSCQSQSS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0721 457 MobiDBLite consensus disorder prediction 270 286 - -
Dere01g0721 457 MobiDBLite consensus disorder prediction 117 136 - -
Dere01g0721 457 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 103 306 - -
Dere01g0721 457 SMART rav1_2 227 275 IPR001471 GO:0003700|GO:0006355
Dere01g0721 457 SMART rav1_2 135 197 IPR001471 GO:0003700|GO:0006355
Dere01g0721 457 MobiDBLite consensus disorder prediction 1 36 - -
Dere01g0721 457 ProSiteProfiles AP2/ERF domain profile. 135 191 IPR001471 GO:0003700|GO:0006355
Dere01g0721 457 CDD AP2 135 190 IPR001471 GO:0003700|GO:0006355
Dere01g0721 457 MobiDBLite consensus disorder prediction 51 87 - -
Dere01g0721 457 MobiDBLite consensus disorder prediction 266 311 - -
Dere01g0721 457 SUPERFAMILY DNA-binding domain 134 192 IPR016177 GO:0003677
Dere01g0721 457 MobiDBLite consensus disorder prediction 12 28 - -
Dere01g0721 457 Gene3D AP2/ERF domain 134 193 IPR036955 GO:0003700|GO:0006355
Dere01g0721 457 FunFam AP2-like ethylene-responsive transcription factor 134 193 - -
Dere01g0721 457 Pfam AP2 domain 135 183 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0721 Dere-ChrDere01 14598751 14601983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0721 1 416 AP2-EREBP Transcription Factor Family AT5G60120 40.929 1.11e-69 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere01g0721 AP2 6.4e-10 CL0081