Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0714 ATGCCGGAGATGACGATGACCGCTAACAATGGTAGCATTAGCAATGGCGTGAGCGGTCAATTCGGGGACACCACGCTGACCAAAGTGTTTGTGGGAGGATTGGCTTGGGAGACTCCCAAGGAGGTCATGAGAGAGCACTTTCAGAAGTACGGCGAGATCCTTGAGGCCGTCATTATCTCCGATAAGGCCACCGGCAGATCCAAGGGCTATGGCTTCGTGACGTTCAAGGAAGCTGAGGCGGCTAAGAAGGCTTGCGAGGATCCCACGCCGATCATCAATGGCCGTCGAGCCAACTGCAATCTGGCTTCGCTCGGCGCGCGCCGCCCTAGGTCCACCAACACTTCACCTCCTCGTCAACAAGGATCGAACGGCGGAGGACCAAGGAACGCCTCAAGTGCACCTCCCCCGCCAGCCAATCACGTCCAGTGGTATTATCCGGTGGGGACACCTGCTTCTCATTTCCATCATCACCACCATCAGGCCGTTCCTTTATATGGGTACACCCCAACCTACATTGCAACGGACCCGAATTACAATCAGAAGCTAGGCTACACCGGTGGTGGGCCCTACATGAACGGTTACTACTCTCCTGTGTATCCGAGCCAGGCTATGGTGGGTGGGAACACATTGATGCCGATGTACCCTCTTTACCAGTATCATCAAACGCACACCATGGGCCTACCTGCCCACATCTTCCAGCCAACCACGCCGCGGCACGTGGCCATCATGTCGAAGCCCGCGTCCATCACTCCCAACTCAGGTGCGTCACATGGTAACATGCCCAACCAACCCCAGTCAATGTCTGTAAGCAACAACACGAATCATTGTGGTCACGTGACCTTGATATCGTGA 852 0.5552 MPEMTMTANNGSISNGVSGQFGDTTLTKVFVGGLAWETPKEVMREHFQKYGEILEAVIISDKATGRSKGYGFVTFKEAEAAKKACEDPTPIINGRRANCNLASLGARRPRSTNTSPPRQQGSNGGGPRNASSAPPPPANHVQWYYPVGTPASHFHHHHHQAVPLYGYTPTYIATDPNYNQKLGYTGGGPYMNGYYSPVYPSQAMVGGNTLMPMYPLYQYHQTHTMGLPAHIFQPTTPRHVAIMSKPASITPNSGASHGNMPNQPQSMSVSNNTNHCGHVTLIS 283
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0714 283 PANTHER BOULE-RELATED 13 266 - -
Dere01g0714 283 Gene3D - 22 133 IPR012677 -
Dere01g0714 283 FunFam Putative RNA-binding protein ARP1 21 110 - -
Dere01g0714 283 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 86 IPR000504 GO:0003723
Dere01g0714 283 CDD RRM_RBM24_RBM38_like 27 102 - -
Dere01g0714 283 MobiDBLite consensus disorder prediction 105 129 - -
Dere01g0714 283 MobiDBLite consensus disorder prediction 250 273 - -
Dere01g0714 283 MobiDBLite consensus disorder prediction 104 141 - -
Dere01g0714 283 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 104 IPR000504 GO:0003723
Dere01g0714 283 SMART rrm1_1 28 100 IPR000504 GO:0003723
Dere01g0714 283 SUPERFAMILY RNA-binding domain, RBD 23 129 IPR035979 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g0714 Dere-ChrDere01 14459435 14461980 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0714 7 178 C2H2 Transcription Factor Family AT2G19380 30.645 1.85e-17 80.5