Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere01g0709 | ATGGAGCAGCAACACGAAGAGCATGAAGTGTACGGAGCAGATATTCCCGACGAGGGGGAGATGGACGCAGATTTTGGAGTTGAAGAAGAAGAAGAAGAAGACCAGCATAACTCCAATCCCCCAAATAAGGACTTGGAGGACATGAAGAAGAGGCTCAAGGAGATTGAGGAAGAAGCCAGCGCCCTTCGCGAAATGCAGGCTAAGGTTGAGAAAGAGATGGGTGTTGTTCAAGATTCATCTGGTTCTTCTGCAAGTCAAGCTGAAAAGGAGGAAGTGGATTCCCGATCAATCTATGTTGGTAATGTTGACTATGCTTGTACACCTGAAGAAGTCCAACAGCATTTTCAGTCCTGTGGAACTGTGAACAGAGTGACGATATTGACAGACAAATTTGGTCAACCAAAAGGATTTGCTTATGTTGAGTTTGTCGAGGTTGATGCTGTTCAGAATGCTCTTCTGTTGAATGAATCAGAATTGCATGGTCGACAATTGAAGGTCTCTGCTAAGCGAACAAACATTCCTGGAATGAAACAGTATCGTGGAAGAAGACCAATGGGTTTGCGTCCTAGAATGCCTTTCATGCCTTCTCCGTTCTATCCTCCATATGGTTATGGGAGGTTTCCAAGGTATAGGCGACCCACACGGTACAGGCCATACTAG | 660 | 0.4545 | MEQQHEEHEVYGADIPDEGEMDADFGVEEEEEEDQHNSNPPNKDLEDMKKRLKEIEEEASALREMQAKVEKEMGVVQDSSGSSASQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPMGLRPRMPFMPSPFYPPYGYGRFPRYRRPTRYRPY | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere01g0709 | 219 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Dere01g0709 | 219 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - | |
Dere01g0709 | 219 | FunFam | Polyadenylate-binding protein 1 | 89 | 175 | - | - | |
Dere01g0709 | 219 | SUPERFAMILY | RNA-binding domain, RBD | 85 | 193 | IPR035979 | GO:0003676 | |
Dere01g0709 | 219 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 97 | 165 | IPR000504 | GO:0003723 | |
Dere01g0709 | 219 | SMART | rrm1_1 | 96 | 167 | IPR000504 | GO:0003723 | |
Dere01g0709 | 219 | MobiDBLite | consensus disorder prediction | 36 | 71 | - | - | |
Dere01g0709 | 219 | Gene3D | - | 18 | 177 | IPR012677 | - | |
Dere01g0709 | 219 | CDD | RRM_II_PABPs | 96 | 167 | - | - | |
Dere01g0709 | 219 | Coils | Coil | 42 | 72 | - | - | |
Dere01g0709 | 219 | MobiDBLite | consensus disorder prediction | 16 | 35 | - | - | |
Dere01g0709 | 219 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H | 26 | 207 | - | - | |
Dere01g0709 | 219 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 95 | 171 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere01g0709 | Dere-ChrDere01 | 14346426 | 14358074 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere01g0709 | 96 | 167 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 36.842 | 8.00e-10 | 56.2 |