Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0704 ATGGCCTCAAAAATAATTAGCAGTTATGCCACTTCCGTCTTCTCTGACATTGACACCACCCCAGTTCCTGGCGACAAATCCCAACTTGCCAAATGGTTCAACGGCATTGTAGGGCCATTATCACAACGAATGAATAGCCTTGACCCTACACTTGTAGCTGCTGAGAAGGGTGCATATGTACTGAGAGTAATGCAAGATGGGAGTGGAAATTTCAAGACGGTCAAAGACGCCATTAAAAGCATCCCAAGCGGGAACACAAAGCGTGTGATTGTGTACATTGGAGGTGGGACTTACACTGAGAAAATCAAGATTGATAAGACAAAGCCATTTGTGACATTGTATGGGGAACCTGGGAGCATGCCCAACTTGACATTTAATGACACTGCAGAACAAACCCACGGCACCTATGTTAGTGCATCCTTATTTGTTGAATCGGATTACTTTGTTGCTGCAAATATCATCATCACGAACACAACATTGAACGTGGTAGAAAAAGACAAAGGAGTAATAGCTGCTCAAGCAAGGACGAACGATTCGGATGACACAGGCTTCTCATTTGTGTATTGTGAGATAAGTGGCACTGCGAATGGCACGTACTTGGGCAGAGCGTGGAGGTCACATCCCAAAGTTGTGTATGCTTACACTACCATGAGCCCAATTGTGAACCCTCTTGGATGGGACGACGGTCCTAATGGCACTCCCACCACTGTATATTATGGGGAGTACAAGAACAATGGAGCAGGTGCAAATGGCAAAGGACGTGCTAGTTTCACCAAGTGGCTAAGTGATTCCGAGGCTTACCCTTTCATCAACCTTGGCTACATTGAGGCTTCCAAGTGGCTGCTTCCTCCTCCTGCTCTCAAAATCTAG 870 0.4598 MASKIISSYATSVFSDIDTTPVPGDKSQLAKWFNGIVGPLSQRMNSLDPTLVAAEKGAYVLRVMQDGSGNFKTVKDAIKSIPSGNTKRVIVYIGGGTYTEKIKIDKTKPFVTLYGEPGSMPNLTFNDTAEQTHGTYVSASLFVESDYFVAANIIITNTTLNVVEKDKGVIAAQARTNDSDDTGFSFVYCEISGTANGTYLGRAWRSHPKVVYAYTTMSPIVNPLGWDDGPNGTPTTVYYGEYKNNGAGANGKGRASFTKWLSDSEAYPFINLGYIEASKWLLPPPALKI 289
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0704 289 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 157 281 - -
Dere01g0704 289 Gene3D - 26 158 IPR012334 -
Dere01g0704 289 SUPERFAMILY Pectin lyase-like 58 281 IPR011050 -
Dere01g0704 289 Gene3D - 159 284 IPR012334 -
Dere01g0704 289 Pfam Pectinesterase 63 159 IPR000070 GO:0030599|GO:0042545
Dere01g0704 289 Pfam Pectinesterase 164 275 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g0704 Dere-ChrDere01 14313204 14315038 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0704 13 287 Carbohydrate Esterase AT1G69940 42.939 1.56e-82 251