Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0703 ATGGCCTCAAAAATAATTAGCAGTTATGCCACTTCCGTCTTCTCTGACATTGACACCACCCCAGTTCCTGGCGACAAATCCCAACTTGCCAAATGGTTCAACGGCATTGTAGGGCCATTATCACAACGAATGAATAGCCTTGACCCTACACTTGTAGCTGCTGAGAAGGGTGCATATGTACTGAGAGTAATGCAAGATGGGAGTGGAAATTTCAAGACGGTCAAAGACGCCATTAAAAGCATCCCAAGCGGGAACACAAAGCGTGTGATTGTGTACATTGGAGGTGGGACTTACACTGAGAAAATCAAGATTGATAAGACAAAGCCATTTGTGACATTGTATGGGGAACCTGGGAGCATGCCCAACTTGACATTTAATGACACTGCAGAACAAACCCACGGCACCTATGCTAGTGCATCCTTATTTGTTGAATCGGATTACTTTGTTGCTGCAAATATCATCATCACGAACACAACATTGAACGTGGTAGAAATGGACAAAGGAGTAATAGCTGCACAAGCAAGGACGAACGATTCTGATGACACAGGCTTCTCATTTGTGTATTGTGAGATAAGTGGCACTGCGAATGGCACGTACTTGGGCAGAGCGTGGAGGTCACATCCCAAAGTTGTGTATGCTTACACTACCATGAGCCCAATTGTGAACCCTCTTGGATGGGACGACGGTCCTAATGGCACTCCCACCACTGTAAATTATGGGGAGTACAAGAACAATGGAGCAGGTGCAAATGGCAAAGGACGTGCTAGTTTCACCAAGTGGCTAAGTGATTCTGAGGCTTACCCTTTCATCAACCTTGGCTACATTGAGGCTTCCAAGTGGCTGCTTCCTCCTCCTTCTCTAAAAATCTAG 870 0.4575 MASKIISSYATSVFSDIDTTPVPGDKSQLAKWFNGIVGPLSQRMNSLDPTLVAAEKGAYVLRVMQDGSGNFKTVKDAIKSIPSGNTKRVIVYIGGGTYTEKIKIDKTKPFVTLYGEPGSMPNLTFNDTAEQTHGTYASASLFVESDYFVAANIIITNTTLNVVEMDKGVIAAQARTNDSDDTGFSFVYCEISGTANGTYLGRAWRSHPKVVYAYTTMSPIVNPLGWDDGPNGTPTTVNYGEYKNNGAGANGKGRASFTKWLSDSEAYPFINLGYIEASKWLLPPPSLKI 289
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0703 289 Pfam Pectinesterase 164 275 IPR000070 GO:0030599|GO:0042545
Dere01g0703 289 Pfam Pectinesterase 63 159 IPR000070 GO:0030599|GO:0042545
Dere01g0703 289 Gene3D - 25 160 IPR012334 -
Dere01g0703 289 Gene3D - 161 284 IPR012334 -
Dere01g0703 289 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 158 281 - -
Dere01g0703 289 SUPERFAMILY Pectin lyase-like 58 281 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g0703 Dere-ChrDere01 14285478 14287284 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0703 13 287 Carbohydrate Esterase AT1G69940 42.363 1.30e-80 246