Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0702 ATGAATAGCCTTGACCCTGCACTTGTAGCTGCAGAGAAGGGAGCATATGTAGTGAAGGTAATGCAAGATGGGAGTGGATATTTCAGGACAGTCAAAGATGCCATTAACAGCATCCTAAGCGGGAACACAAATCGTGTGATTGTGTACATTGGAGAACAAACCCACGGCACCTATGCTAGTGCTTCCTTATTTGTTGAATCGGATTACTTTGTTGCTGCAAATATCATCATCATGAACACAACATTGAACGTGGTAGAAAAGGACAAAGGAGTAATAGCTGCACAAGCAAGGACAAACGATTCTGATGACACAGGCTTCTCATTTGTGTATTGTGAGATAAGTGGCACTGCGAATGGCACGTACTTGGGCAGAGCGTGGAGGTCACATCCCAAAGTTGTGTATGCTTACACTACCATGAGCCCAATTGTGAACCCTCTTGGATGGGACGATGGTCCTAATGGCACTCCCACCACTGTAAATTATGGGGAGTACAAGAACAATGGGGCAGGTGCAAATGGCAAAGGACGTGCTAGTTTCACCAAGTGGCTAAGTGATTCTGAGGCTTACCCTTTCATCAACCTTGGCTACATTGAGGCTTCCAAGTGGCTGCTTCCTCCTCCTTCTCTAAAAATCTAG 636 0.456 MNSLDPALVAAEKGAYVVKVMQDGSGYFRTVKDAINSILSGNTNRVIVYIGEQTHGTYASASLFVESDYFVAANIIIMNTTLNVVEKDKGVIAAQARTNDSDDTGFSFVYCEISGTANGTYLGRAWRSHPKVVYAYTTMSPIVNPLGWDDGPNGTPTTVNYGEYKNNGAGANGKGRASFTKWLSDSEAYPFINLGYIEASKWLLPPPSLKI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0702 211 Pfam Pectinesterase 86 197 IPR000070 GO:0030599|GO:0042545
Dere01g0702 211 SUPERFAMILY Pectin lyase-like 15 203 IPR011050 -
Dere01g0702 211 Gene3D - 73 206 IPR012334 -
Dere01g0702 211 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 52 - -
Dere01g0702 211 Gene3D - 13 59 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0702 Dere-ChrDere01 14261220 14262893 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0702 4 209 Carbohydrate Esterase AT5G07410 34.615 2.79e-46 154